Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01428

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; spin-x control
				remove
1,489,388	-			-0.6
1,489,388	-			+0.7
1,489,407	+			+2.2
1,489,407	+			-0.8
1,489,408	-			-1.3
1,489,432	+			-1.1
1,489,432	+			-0.4
1,489,442	+			+1.0
1,489,442	+			+1.7
1,489,442	+			+0.1
1,489,442	+			-1.5
1,489,442	+			-0.9
1,489,442	+			-1.6
1,489,442	+			-0.8
1,489,442	+			+0.2
1,489,443	-			+1.0
1,489,443	-			+0.4
1,489,443	-			-0.0
1,489,443	-			+0.7
1,489,443	-			-0.0
1,489,443	-			+1.2
1,489,443	-			+0.1
1,489,443	-			+0.2
1,489,443	-			-1.1
1,489,443	-			-0.1
1,489,443	-			-0.3
1,489,495	+	MPMX19_01426	0.23	-0.7
1,489,616	+	MPMX19_01426	0.79	+0.4
1,489,616	+	MPMX19_01426	0.79	-0.8
1,489,617	-	MPMX19_01426	0.80	-0.9
1,489,672	+			-0.3
1,489,672	+			+0.0
1,489,672	+			+0.0
1,489,672	+			-0.2
1,489,672	+			-2.1
1,489,672	+			-0.3
1,489,673	-			-0.5
1,489,673	-			-1.8
1,489,673	-			-0.0
1,489,673	-			+0.6
1,489,673	-			-0.8
1,489,673	-			+0.0
1,489,673	-			-0.4
1,489,673	-			+0.8
1,489,774	+	MPMX19_01427	0.21	-0.2
1,489,774	+	MPMX19_01427	0.21	-0.9
1,489,774	+	MPMX19_01427	0.21	+0.1
1,489,774	+	MPMX19_01427	0.21	+1.2
1,489,774	+	MPMX19_01427	0.21	-0.1
1,489,774	+	MPMX19_01427	0.21	-1.1
1,489,774	+	MPMX19_01427	0.21	-0.1
1,489,774	+	MPMX19_01427	0.21	-1.8
1,489,774	+	MPMX19_01427	0.21	-0.9
1,489,774	+	MPMX19_01427	0.21	-1.8
1,489,775	-	MPMX19_01427	0.21	-0.1
1,489,775	-	MPMX19_01427	0.21	-0.1
1,489,775	-	MPMX19_01427	0.21	-0.6
1,489,775	-	MPMX19_01427	0.21	-1.4
1,489,882	+	MPMX19_01427	0.42	+0.2
1,489,883	-	MPMX19_01427	0.43	-1.0
1,489,883	-	MPMX19_01427	0.43	-0.5
1,489,906	+	MPMX19_01427	0.47	-1.0
1,489,906	+	MPMX19_01427	0.47	-1.6
1,489,906	+	MPMX19_01427	0.47	-0.9
1,489,906	+	MPMX19_01427	0.47	+0.0
1,489,906	+	MPMX19_01427	0.47	-1.1
1,489,906	+	MPMX19_01427	0.47	-0.9
1,489,906	+	MPMX19_01427	0.47	-1.2
1,489,906	+	MPMX19_01427	0.47	-0.4
1,489,906	+	MPMX19_01427	0.47	+0.6
1,489,906	+	MPMX19_01427	0.47	-0.2
1,489,906	+	MPMX19_01427	0.47	-0.3
1,489,907	-	MPMX19_01427	0.47	+1.0
1,489,907	-	MPMX19_01427	0.47	+0.5
1,489,907	-	MPMX19_01427	0.47	+0.0
1,489,907	-	MPMX19_01427	0.47	+0.4
1,489,907	-	MPMX19_01427	0.47	+0.5
1,489,907	-	MPMX19_01427	0.47	-0.7
1,489,907	-	MPMX19_01427	0.47	+0.1
1,489,907	-	MPMX19_01427	0.47	-1.6
1,489,907	-	MPMX19_01427	0.47	+0.2
1,489,907	-	MPMX19_01427	0.47	+0.1
1,489,907	-	MPMX19_01427	0.47	+0.3
1,489,907	-	MPMX19_01427	0.47	+0.3
1,489,907	-	MPMX19_01427	0.47	-1.2
1,489,907	-	MPMX19_01427	0.47	-0.3
1,489,907	-	MPMX19_01427	0.47	-0.6
1,489,907	-	MPMX19_01427	0.47	+0.8
1,489,907	-	MPMX19_01427	0.47	+0.8
1,489,907	-	MPMX19_01427	0.47	-1.1
1,489,921	+	MPMX19_01427	0.50	-0.8
1,489,921	+	MPMX19_01427	0.50	-0.4
1,489,921	+	MPMX19_01427	0.50	+0.6
1,489,921	+	MPMX19_01427	0.50	+0.0
1,489,921	+	MPMX19_01427	0.50	+0.1
1,489,921	+	MPMX19_01427	0.50	-2.2
1,489,921	+	MPMX19_01427	0.50	-1.9
1,489,921	+	MPMX19_01427	0.50	+0.1
1,489,921	+	MPMX19_01427	0.50	-0.2
1,489,921	+	MPMX19_01427	0.50	-0.4
1,489,921	+	MPMX19_01427	0.50	-0.0
1,489,921	+	MPMX19_01427	0.50	+0.4
1,489,921	+	MPMX19_01427	0.50	-0.9
1,489,922	-	MPMX19_01427	0.50	+0.4
1,489,922	-	MPMX19_01427	0.50	-0.2
1,489,922	-	MPMX19_01427	0.50	+0.4
1,489,922	-	MPMX19_01427	0.50	-0.4
1,489,922	-	MPMX19_01427	0.50	+0.9
1,489,922	-	MPMX19_01427	0.50	-0.1
1,489,922	-	MPMX19_01427	0.50	+0.2
1,489,922	-	MPMX19_01427	0.50	+0.3
1,490,235	+			-0.9
1,490,236	-			-0.4
1,490,236	-			-0.1
1,490,284	+			+0.5
1,490,284	+			+2.2
1,490,284	+			+0.6
1,490,284	+			-1.0
1,490,284	+			-1.4
1,490,284	+			-0.8
1,490,284	+			-0.5
1,490,284	+			+0.2
1,490,284	+			-2.4
1,490,285	-			-0.4
1,490,285	-			-0.2
1,490,285	-			+1.3
1,490,285	-			-0.8
1,490,285	-			-1.9
1,490,285	-			+0.2
1,490,285	-			+0.9
1,490,285	-			+0.0
1,490,285	-			+0.8
1,490,306	+			-2.8
1,490,306	+			-1.3
1,490,306	+			+0.3
1,490,306	+			+0.7
1,490,306	+			-0.7
1,490,306	+			-0.5
1,490,306	+			-0.6
1,490,368	+			-1.1
1,490,368	+			-0.1
1,490,368	+			-2.2
1,490,368	+			+1.9
1,490,368	+			+1.0
1,490,368	+			-0.8
1,490,912	+	MPMX19_01428	0.49	+0.7
1,490,912	+	MPMX19_01428	0.49	+0.6
1,490,912	+	MPMX19_01428	0.49	+1.7
1,490,912	+	MPMX19_01428	0.49	+0.6
1,490,912	+	MPMX19_01428	0.49	-0.8
1,490,912	+	MPMX19_01428	0.49	-0.2
1,490,912	+	MPMX19_01428	0.49	-1.8
1,490,912	+	MPMX19_01428	0.49	-0.6
1,490,912	+	MPMX19_01428	0.49	-0.2
1,490,912	+	MPMX19_01428	0.49	-1.1
1,490,912	+	MPMX19_01428	0.49	+0.6
1,490,913	-	MPMX19_01428	0.49	+0.2
1,490,913	-	MPMX19_01428	0.49	-2.1
1,490,913	-	MPMX19_01428	0.49	-0.7
1,490,913	-	MPMX19_01428	0.49	-0.2
1,490,913	-	MPMX19_01428	0.49	+0.3
1,490,913	-	MPMX19_01428	0.49	+0.5
1,490,913	-	MPMX19_01428	0.49	-1.1
1,490,913	-	MPMX19_01428	0.49	-0.1
1,490,913	-	MPMX19_01428	0.49	-0.9
1,490,913	-	MPMX19_01428	0.49	-1.2
1,490,913	-	MPMX19_01428	0.49	+0.4
1,490,913	-	MPMX19_01428	0.49	+0.1
1,490,913	-	MPMX19_01428	0.49	-0.6
1,490,913	-	MPMX19_01428	0.49	+1.5
1,490,964	-	MPMX19_01428	0.54	-0.4
1,490,964	-	MPMX19_01428	0.54	+1.5
1,491,131	+	MPMX19_01428	0.69	+0.9
1,491,131	+	MPMX19_01428	0.69	+0.5
1,491,131	+	MPMX19_01428	0.69	+1.8
1,491,131	+	MPMX19_01428	0.69	-1.2
1,491,131	+	MPMX19_01428	0.69	-0.3
1,491,131	+	MPMX19_01428	0.69	+0.1
1,491,131	+	MPMX19_01428	0.69	+0.0
1,491,131	+	MPMX19_01428	0.69	-2.1
1,491,131	+	MPMX19_01428	0.69	+1.0
1,491,131	+	MPMX19_01428	0.69	+0.9
1,491,131	+	MPMX19_01428	0.69	+0.8
1,491,131	+	MPMX19_01428	0.69	-0.1
1,491,132	-	MPMX19_01428	0.69	+0.5
1,491,132	-	MPMX19_01428	0.69	+0.3
1,491,132	-	MPMX19_01428	0.69	+0.2
1,491,132	-	MPMX19_01428	0.69	-0.9
1,491,132	-	MPMX19_01428	0.69	+0.0
1,491,132	-	MPMX19_01428	0.69	+0.0
1,491,272	+	MPMX19_01428	0.82	-1.1
1,491,272	+	MPMX19_01428	0.82	+0.1
1,491,273	-	MPMX19_01428	0.82	-0.8
1,491,273	-	MPMX19_01428	0.82	-1.2
1,491,711	+			+0.0
1,491,711	+			+0.2
1,491,711	+			-0.3
1,491,711	+			+1.2
1,491,711	+			-0.5
1,491,711	+			-2.2
1,491,711	+			+0.1
1,491,711	+			-2.0
1,491,711	+			-0.1
1,491,711	+			+0.8
1,491,711	+			-1.2
1,491,711	+			-0.6
1,491,711	+			-0.1
1,491,711	+			-0.3
1,491,711	+			-0.1
1,491,711	+			-1.2
1,491,711	+			-1.8
1,491,711	+			-0.7
1,491,711	+			+0.2
1,491,711	+			+0.0
1,491,711	+			-0.8
1,491,711	+			-1.6
1,491,711	+			-0.0
1,491,711	+			-0.7
1,491,711	+			-0.6
1,491,711	+			+1.1
1,491,712	-			-3.2
1,491,712	-			-1.3
1,491,712	-			-0.3
1,491,712	-			-1.1
1,491,712	-			+2.5
1,491,712	-			-2.4
1,491,712	-			-1.1
1,491,712	-			-1.6
1,491,712	-			+0.6
1,491,712	-			-0.4
1,491,712	-			+0.2
1,491,712	-			+0.1
1,491,712	-			-2.3
1,491,712	-			+0.2
1,491,712	-			+0.2
1,491,712	-			-0.2
1,491,712	-			-1.1
1,491,712	-			-0.6
1,491,712	-			+0.7
1,491,712	-			-1.8
1,491,712	-			+0.6
1,491,712	-			-0.6
1,491,712	-			+0.9
1,491,712	-			+0.2
1,491,712	-			+0.2
1,491,712	-			-2.3
1,491,712	-			-0.2
1,491,712	-			-0.8
1,491,712	-			+0.7
1,491,712	-			-0.7
1,491,713	+			+1.2
1,491,713	+			-0.3
1,491,713	+			-0.6
1,491,714	-			-1.6
1,491,714	-			-0.1
1,491,714	-			-0.6
1,491,714	-			+0.4
1,491,725	+			-0.4
1,491,725	+			+0.0
1,491,726	-			+0.1
1,491,726	-			-1.8
1,491,726	-			-1.1
1,491,726	-			-0.3
1,491,726	-			+1.4
1,491,726	-			+0.3
1,491,783	+			+0.0
1,491,783	+			-0.6
1,491,783	+			+1.7
1,491,784	-			-1.1
1,491,784	-			+0.5
1,492,137	+	MPMX19_01429	0.24	-0.2
1,492,137	+	MPMX19_01429	0.24	-0.3
1,492,137	+	MPMX19_01429	0.24	+0.2
1,492,137	+	MPMX19_01429	0.24	-1.1
1,492,137	+	MPMX19_01429	0.24	-0.1
1,492,137	+	MPMX19_01429	0.24	+1.2
1,492,137	+	MPMX19_01429	0.24	-0.2
1,492,137	+	MPMX19_01429	0.24	-1.6
1,492,138	-	MPMX19_01429	0.25	-0.2
1,492,138	-	MPMX19_01429	0.25	-0.3
1,492,138	-	MPMX19_01429	0.25	-1.0
1,492,138	-	MPMX19_01429	0.25	-0.3
1,492,138	-	MPMX19_01429	0.25	-1.4
1,492,138	-	MPMX19_01429	0.25	+0.1
1,492,138	-	MPMX19_01429	0.25	-1.6
1,492,138	-	MPMX19_01429	0.25	-1.9
1,492,356	+	MPMX19_01429	0.42	+0.4
1,492,356	+	MPMX19_01429	0.42	-0.6
1,492,356	+	MPMX19_01429	0.42	-1.1
1,492,357	-	MPMX19_01429	0.42	+0.4
1,492,357	-	MPMX19_01429	0.42	-0.1
1,492,357	-	MPMX19_01429	0.42	-1.8
1,492,357	-	MPMX19_01429	0.42	-1.6
1,492,357	-	MPMX19_01429	0.42	-0.2
1,492,357	-	MPMX19_01429	0.42	-2.1
1,492,357	-	MPMX19_01429	0.42	+0.5
1,492,357	-	MPMX19_01429	0.42	-0.3
1,492,357	-	MPMX19_01429	0.42	+0.1
1,492,357	-	MPMX19_01429	0.42	-0.1

Or see this region's nucleotide sequence