Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF815 and GFF816 are separated by 33 nucleotides GFF816 and GFF817 overlap by 14 nucleotides
GFF815 - Putative aliphatic sulfonates-binding protein, at 872,132 to 873,148
GFF815
GFF816 - Aliphatic sulfonates import ATP-binding protein SsuB, at 873,182 to 873,982
GFF816
GFF817 - Putative aliphatic sulfonates transport permease protein SsuC, at 873,969 to 874,859
GFF817
Position (kb) 873
874 Strain fitness (log2 ratio) -1
0
1 at 872.340 kb on + strand, within GFF815 at 872.340 kb on + strand, within GFF815 at 872.341 kb on - strand, within GFF815 at 872.341 kb on - strand, within GFF815 at 872.373 kb on + strand, within GFF815 at 872.373 kb on + strand, within GFF815 at 872.374 kb on - strand, within GFF815 at 872.632 kb on - strand, within GFF815 at 872.673 kb on + strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.683 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.916 kb on + strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.970 kb on + strand, within GFF815 at 872.970 kb on + strand, within GFF815 at 873.031 kb on - strand, within GFF815 at 873.218 kb on + strand at 873.323 kb on + strand, within GFF816 at 873.970 kb on + strand at 873.970 kb on + strand at 873.970 kb on + strand at 873.970 kb on + strand at 873.971 kb on - strand at 873.971 kb on - strand at 874.318 kb on + strand, within GFF817 at 874.319 kb on - strand, within GFF817 at 874.330 kb on + strand, within GFF817 at 874.330 kb on + strand, within GFF817 at 874.429 kb on - strand, within GFF817
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 872,340 + GFF815 0.20 +0.4 872,340 + GFF815 0.20 +0.5 872,341 - GFF815 0.21 -0.6 872,341 - GFF815 0.21 -0.4 872,373 + GFF815 0.24 +0.5 872,373 + GFF815 0.24 -0.2 872,374 - GFF815 0.24 +0.7 872,632 - GFF815 0.49 -1.0 872,673 + GFF815 0.53 +0.4 872,674 - GFF815 0.53 +0.1 872,674 - GFF815 0.53 -0.3 872,674 - GFF815 0.53 +0.3 872,674 - GFF815 0.53 +0.1 872,674 - GFF815 0.53 -0.8 872,674 - GFF815 0.53 -0.0 872,683 - GFF815 0.54 +0.2 872,782 - GFF815 0.64 -0.4 872,782 - GFF815 0.64 +0.1 872,782 - GFF815 0.64 -0.3 872,916 + GFF815 0.77 -0.0 872,917 - GFF815 0.77 -1.0 872,917 - GFF815 0.77 -0.1 872,917 - GFF815 0.77 +0.3 872,970 + GFF815 0.82 -0.5 872,970 + GFF815 0.82 +0.1 873,031 - GFF815 0.88 -0.1 873,218 + +0.9 873,323 + GFF816 0.18 -0.8 873,970 + -0.3 873,970 + +0.3 873,970 + -0.5 873,970 + +0.5 873,971 - +1.7 873,971 - -0.2 874,318 + GFF817 0.39 -0.0 874,319 - GFF817 0.39 +1.2 874,330 + GFF817 0.41 +0.2 874,330 + GFF817 0.41 -0.6 874,429 - GFF817 0.52 +0.2
Or see this region's nucleotide sequence