Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF798 and GFF799 are separated by 48 nucleotides GFF799 and GFF800 overlap by 4 nucleotides
GFF798 - FMNH(2)-dependent dimethylsulfone monooxygenase, at 851,434 to 852,585
GFF798
GFF799 - Vitamin B12 import ATP-binding protein BtuD, at 852,634 to 853,644
GFF799
GFF800 - Oligopeptide transport ATP-binding protein OppD, at 853,641 to 854,663
GFF800
Position (kb) 852
853
854 Strain fitness (log2 ratio) -2
-1
0
1 at 851.723 kb on + strand, within GFF798 at 851.724 kb on - strand, within GFF798 at 851.724 kb on - strand, within GFF798 at 851.912 kb on + strand, within GFF798 at 851.913 kb on - strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.984 kb on + strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 851.985 kb on - strand, within GFF798 at 852.083 kb on + strand, within GFF798 at 852.084 kb on - strand, within GFF798 at 852.084 kb on - strand, within GFF798 at 852.180 kb on + strand, within GFF798 at 852.180 kb on + strand, within GFF798 at 852.180 kb on + strand, within GFF798 at 852.181 kb on - strand, within GFF798 at 852.181 kb on - strand, within GFF798 at 852.327 kb on - strand, within GFF798 at 852.428 kb on + strand, within GFF798 at 852.429 kb on - strand, within GFF798 at 852.551 kb on + strand at 852.902 kb on + strand, within GFF799 at 852.902 kb on + strand, within GFF799 at 852.902 kb on + strand, within GFF799 at 852.902 kb on + strand, within GFF799 at 852.903 kb on - strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.965 kb on + strand, within GFF799 at 852.966 kb on - strand, within GFF799 at 852.966 kb on - strand, within GFF799 at 852.966 kb on - strand, within GFF799 at 852.966 kb on - strand, within GFF799 at 852.966 kb on - strand, within GFF799 at 853.028 kb on + strand, within GFF799 at 853.028 kb on + strand, within GFF799 at 853.028 kb on + strand, within GFF799 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.969 kb on + strand, within GFF800 at 853.970 kb on - strand, within GFF800 at 853.970 kb on - strand, within GFF800 at 853.970 kb on - strand, within GFF800
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 851,723 + GFF798 0.25 +1.0 851,724 - GFF798 0.25 +1.0 851,724 - GFF798 0.25 -0.5 851,912 + GFF798 0.41 -0.0 851,913 - GFF798 0.42 -0.9 851,984 + GFF798 0.48 +0.5 851,984 + GFF798 0.48 -0.3 851,984 + GFF798 0.48 -0.0 851,984 + GFF798 0.48 -0.2 851,984 + GFF798 0.48 -1.5 851,984 + GFF798 0.48 +0.3 851,985 - GFF798 0.48 +0.1 851,985 - GFF798 0.48 -0.6 851,985 - GFF798 0.48 -1.0 851,985 - GFF798 0.48 -0.5 851,985 - GFF798 0.48 -0.8 851,985 - GFF798 0.48 +0.0 852,083 + GFF798 0.56 -0.0 852,084 - GFF798 0.56 -0.6 852,084 - GFF798 0.56 -0.0 852,180 + GFF798 0.65 +1.0 852,180 + GFF798 0.65 +0.4 852,180 + GFF798 0.65 +0.2 852,181 - GFF798 0.65 +0.2 852,181 - GFF798 0.65 -1.8 852,327 - GFF798 0.78 -0.2 852,428 + GFF798 0.86 -0.1 852,429 - GFF798 0.86 -0.1 852,551 + +0.1 852,902 + GFF799 0.27 -0.5 852,902 + GFF799 0.27 +0.6 852,902 + GFF799 0.27 +0.3 852,902 + GFF799 0.27 -0.0 852,903 - GFF799 0.27 +0.3 852,965 + GFF799 0.33 -1.4 852,965 + GFF799 0.33 +0.8 852,965 + GFF799 0.33 -0.1 852,965 + GFF799 0.33 -0.6 852,965 + GFF799 0.33 +0.6 852,965 + GFF799 0.33 -0.8 852,965 + GFF799 0.33 -1.0 852,966 - GFF799 0.33 -0.2 852,966 - GFF799 0.33 -0.4 852,966 - GFF799 0.33 +0.1 852,966 - GFF799 0.33 -0.9 852,966 - GFF799 0.33 -2.3 853,028 + GFF799 0.39 -0.5 853,028 + GFF799 0.39 -0.6 853,028 + GFF799 0.39 +0.3 853,969 + GFF800 0.32 +0.4 853,969 + GFF800 0.32 +0.8 853,969 + GFF800 0.32 -0.2 853,969 + GFF800 0.32 +0.1 853,969 + GFF800 0.32 +0.6 853,969 + GFF800 0.32 +0.3 853,969 + GFF800 0.32 -0.4 853,970 - GFF800 0.32 -1.0 853,970 - GFF800 0.32 -0.1 853,970 - GFF800 0.32 -0.1
Or see this region's nucleotide sequence