Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF783 and GFF784 are separated by 3 nucleotides GFF784 and GFF785 are separated by 31 nucleotides GFF785 and GFF786 are separated by 254 nucleotides
GFF783 - Aliphatic sulfonates import ATP-binding protein SsuB, at 835,831 to 836,613
GFF783
GFF784 - Putative aliphatic sulfonates transport permease protein SsuC, at 836,617 to 837,474
GFF784
GFF785 - putative FMNH2-dependent monooxygenase SfnC, at 837,506 to 838,723
GFF785
GFF786 - Bicarbonate transport system permease protein CmpB, at 838,978 to 839,805
GFF786
Position (kb) 837
838
839 Strain fitness (log2 ratio) -2
-1
0
1 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.984 kb on + strand, within GFF784 at 837.023 kb on + strand, within GFF784 at 837.114 kb on - strand, within GFF784 at 837.114 kb on - strand, within GFF784 at 837.816 kb on - strand, within GFF785 at 837.816 kb on - strand, within GFF785 at 837.837 kb on + strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.967 kb on + strand, within GFF785 at 837.968 kb on - strand, within GFF785 at 837.968 kb on - strand, within GFF785 at 837.996 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.252 kb on - strand, within GFF785 at 838.300 kb on + strand, within GFF785 at 838.831 kb on + strand at 838.955 kb on + strand at 839.070 kb on - strand, within GFF786 at 839.102 kb on + strand, within GFF786 at 839.315 kb on - strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.348 kb on + strand, within GFF786 at 839.349 kb on - strand, within GFF786 at 839.349 kb on - strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.543 kb on + strand, within GFF786 at 839.544 kb on - strand, within GFF786 at 839.544 kb on - strand, within GFF786 at 839.544 kb on - strand, within GFF786
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 836,844 - GFF784 0.26 -0.0 836,844 - GFF784 0.26 +0.1 836,844 - GFF784 0.26 -0.0 836,984 + GFF784 0.43 +0.1 837,023 + GFF784 0.47 -2.5 837,114 - GFF784 0.58 -0.1 837,114 - GFF784 0.58 +0.8 837,816 - GFF785 0.25 -0.3 837,816 - GFF785 0.25 -0.1 837,837 + GFF785 0.27 -0.2 837,838 - GFF785 0.27 +0.3 837,838 - GFF785 0.27 +1.1 837,838 - GFF785 0.27 -0.6 837,967 + GFF785 0.38 +0.6 837,968 - GFF785 0.38 +0.5 837,968 - GFF785 0.38 +0.8 837,996 + GFF785 0.40 +0.7 838,215 + GFF785 0.58 +0.1 838,215 + GFF785 0.58 +0.2 838,215 + GFF785 0.58 +0.6 838,215 + GFF785 0.58 -1.0 838,216 - GFF785 0.58 +0.8 838,216 - GFF785 0.58 -0.7 838,221 + GFF785 0.59 -0.7 838,221 + GFF785 0.59 +0.4 838,221 + GFF785 0.59 +0.5 838,221 + GFF785 0.59 -0.5 838,252 - GFF785 0.61 -0.2 838,300 + GFF785 0.65 -1.2 838,831 + +0.5 838,955 + -0.5 839,070 - GFF786 0.11 -0.1 839,102 + GFF786 0.15 +1.1 839,315 - GFF786 0.41 -0.8 839,348 + GFF786 0.45 +0.1 839,348 + GFF786 0.45 +0.2 839,348 + GFF786 0.45 +0.2 839,349 - GFF786 0.45 +0.5 839,349 - GFF786 0.45 +0.5 839,543 + GFF786 0.68 -0.1 839,543 + GFF786 0.68 -0.0 839,543 + GFF786 0.68 -0.9 839,544 - GFF786 0.68 -0.5 839,544 - GFF786 0.68 -0.1 839,544 - GFF786 0.68 +0.3
Or see this region's nucleotide sequence