Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF782 and GFF783 are separated by 34 nucleotides GFF783 and GFF784 are separated by 3 nucleotides GFF784 and GFF785 are separated by 31 nucleotides
GFF782 - hypothetical protein, at 834,732 to 835,796
GFF782
GFF783 - Aliphatic sulfonates import ATP-binding protein SsuB, at 835,831 to 836,613
GFF783
GFF784 - Putative aliphatic sulfonates transport permease protein SsuC, at 836,617 to 837,474
GFF784
GFF785 - putative FMNH2-dependent monooxygenase SfnC, at 837,506 to 838,723
GFF785
Position (kb) 835
836
837 Strain fitness (log2 ratio) -2
-1
0
1
2 at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.228 kb on + strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.229 kb on - strand, within GFF782 at 835.276 kb on + strand, within GFF782 at 835.276 kb on + strand, within GFF782 at 835.277 kb on - strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.319 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.327 kb on + strand, within GFF782 at 835.328 kb on - strand, within GFF782 at 835.523 kb on + strand, within GFF782 at 835.524 kb on - strand, within GFF782 at 835.524 kb on - strand, within GFF782 at 835.595 kb on - strand, within GFF782 at 835.895 kb on + strand at 836.158 kb on + strand, within GFF783 at 836.158 kb on + strand, within GFF783 at 836.159 kb on - strand, within GFF783 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.984 kb on + strand, within GFF784 at 837.023 kb on + strand, within GFF784 at 837.114 kb on - strand, within GFF784 at 837.114 kb on - strand, within GFF784
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 835,228 + GFF782 0.47 -0.3 835,228 + GFF782 0.47 -0.0 835,228 + GFF782 0.47 -0.8 835,228 + GFF782 0.47 +0.9 835,229 - GFF782 0.47 +0.5 835,229 - GFF782 0.47 +0.1 835,229 - GFF782 0.47 -1.3 835,276 + GFF782 0.51 +1.0 835,276 + GFF782 0.51 -0.3 835,277 - GFF782 0.51 +0.9 835,319 + GFF782 0.55 +1.0 835,319 + GFF782 0.55 -0.2 835,319 + GFF782 0.55 +0.4 835,327 + GFF782 0.56 +0.4 835,327 + GFF782 0.56 -0.2 835,327 + GFF782 0.56 +1.8 835,328 - GFF782 0.56 -0.5 835,523 + GFF782 0.74 +0.0 835,524 - GFF782 0.74 -0.1 835,524 - GFF782 0.74 +0.1 835,595 - GFF782 0.81 +0.7 835,895 + -0.1 836,158 + GFF783 0.42 +1.0 836,158 + GFF783 0.42 -1.5 836,159 - GFF783 0.42 +0.1 836,844 - GFF784 0.26 -0.0 836,844 - GFF784 0.26 +0.1 836,844 - GFF784 0.26 -0.0 836,984 + GFF784 0.43 +0.1 837,023 + GFF784 0.47 -2.5 837,114 - GFF784 0.58 -0.1 837,114 - GFF784 0.58 +0.8
Or see this region's nucleotide sequence