Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF764 and GFF765 are separated by 15 nucleotides GFF765 and GFF766 are separated by 4 nucleotides GFF766 and GFF767 are separated by 217 nucleotides
GFF764 - Dimethyl-sulfide monooxygenase, at 815,807 to 817,180
GFF764
GFF765 - Thiosulfate sulfurtransferase GlpE, at 817,196 to 818,818
GFF765
GFF766 - 3-mercaptopropionate dioxygenase, at 818,823 to 819,461
GFF766
GFF767 - Putative aliphatic sulfonates-binding protein, at 819,679 to 820,683
GFF767
Position (kb) 817
818
819 Strain fitness (log2 ratio) -1
0
1
2 at 816.285 kb on - strand, within GFF764 at 816.318 kb on - strand, within GFF764 at 816.425 kb on + strand, within GFF764 at 816.485 kb on + strand, within GFF764 at 816.708 kb on - strand, within GFF764 at 817.085 kb on + strand at 817.085 kb on + strand at 817.085 kb on + strand at 817.086 kb on - strand at 817.086 kb on - strand at 817.086 kb on - strand at 817.266 kb on + strand at 817.266 kb on + strand at 817.266 kb on + strand at 817.267 kb on - strand at 817.267 kb on - strand at 817.267 kb on - strand at 817.305 kb on + strand at 817.306 kb on - strand at 817.494 kb on + strand, within GFF765 at 817.494 kb on + strand, within GFF765 at 817.495 kb on - strand, within GFF765 at 817.495 kb on - strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.521 kb on - strand, within GFF765 at 817.521 kb on - strand, within GFF765 at 817.581 kb on + strand, within GFF765 at 817.582 kb on - strand, within GFF765 at 817.582 kb on - strand, within GFF765 at 817.898 kb on + strand, within GFF765 at 817.898 kb on + strand, within GFF765 at 817.899 kb on - strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 818.318 kb on - strand, within GFF765 at 818.331 kb on + strand, within GFF765 at 818.331 kb on + strand, within GFF765 at 818.539 kb on + strand, within GFF765 at 818.542 kb on - strand, within GFF765 at 818.599 kb on + strand, within GFF765 at 818.604 kb on + strand, within GFF765 at 818.604 kb on + strand, within GFF765 at 818.605 kb on - strand, within GFF765 at 818.635 kb on + strand, within GFF765 at 818.635 kb on + strand, within GFF765 at 818.636 kb on - strand, within GFF765 at 818.811 kb on + strand at 818.811 kb on + strand at 818.811 kb on + strand at 818.882 kb on + strand at 818.882 kb on + strand at 818.882 kb on + strand at 818.883 kb on - strand at 818.923 kb on + strand, within GFF766 at 818.924 kb on - strand, within GFF766 at 818.924 kb on - strand, within GFF766 at 818.960 kb on - strand, within GFF766 at 819.256 kb on + strand, within GFF766 at 819.257 kb on - strand, within GFF766 at 819.257 kb on - strand, within GFF766 at 819.259 kb on + strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.280 kb on + strand, within GFF766
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 816,285 - GFF764 0.35 +0.2 816,318 - GFF764 0.37 +0.3 816,425 + GFF764 0.45 -0.0 816,485 + GFF764 0.49 -0.4 816,708 - GFF764 0.66 -0.9 817,085 + +0.1 817,085 + +0.2 817,085 + +0.1 817,086 - +0.2 817,086 - +0.5 817,086 - -1.3 817,266 + +1.0 817,266 + -1.2 817,266 + -0.2 817,267 - +0.5 817,267 - -0.0 817,267 - +0.6 817,305 + +0.9 817,306 - -0.7 817,494 + GFF765 0.18 +0.3 817,494 + GFF765 0.18 -0.0 817,495 - GFF765 0.18 +0.5 817,495 - GFF765 0.18 -0.0 817,520 + GFF765 0.20 -0.8 817,520 + GFF765 0.20 +1.3 817,520 + GFF765 0.20 -0.7 817,521 - GFF765 0.20 -1.1 817,521 - GFF765 0.20 -0.2 817,581 + GFF765 0.24 -0.6 817,582 - GFF765 0.24 -0.0 817,582 - GFF765 0.24 -0.3 817,898 + GFF765 0.43 +1.3 817,898 + GFF765 0.43 +0.1 817,899 - GFF765 0.43 -0.1 817,956 + GFF765 0.47 +0.1 817,956 + GFF765 0.47 -0.6 817,956 + GFF765 0.47 +0.6 817,956 + GFF765 0.47 +1.9 817,957 - GFF765 0.47 -1.7 817,957 - GFF765 0.47 +0.7 817,957 - GFF765 0.47 -0.2 817,957 - GFF765 0.47 +0.5 817,957 - GFF765 0.47 -0.0 818,318 - GFF765 0.69 +0.4 818,331 + GFF765 0.70 -0.5 818,331 + GFF765 0.70 -0.0 818,539 + GFF765 0.83 -0.4 818,542 - GFF765 0.83 +0.4 818,599 + GFF765 0.86 -1.6 818,604 + GFF765 0.87 -0.4 818,604 + GFF765 0.87 +0.3 818,605 - GFF765 0.87 -0.5 818,635 + GFF765 0.89 -0.1 818,635 + GFF765 0.89 -1.0 818,636 - GFF765 0.89 -0.6 818,811 + -0.1 818,811 + -0.2 818,811 + -0.5 818,882 + -0.9 818,882 + -0.1 818,882 + +0.1 818,883 - +2.0 818,923 + GFF766 0.16 +0.2 818,924 - GFF766 0.16 -0.0 818,924 - GFF766 0.16 -0.1 818,960 - GFF766 0.21 -0.1 819,256 + GFF766 0.68 -0.5 819,257 - GFF766 0.68 -0.1 819,257 - GFF766 0.68 -0.7 819,259 + GFF766 0.68 +0.3 819,260 - GFF766 0.68 -0.3 819,260 - GFF766 0.68 -0.9 819,260 - GFF766 0.68 -0.0 819,280 + GFF766 0.72 +0.2
Or see this region's nucleotide sequence