Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF742 and GFF743 are separated by 77 nucleotides GFF743 and GFF744 are separated by 167 nucleotides GFF744 and GFF745 are separated by 128 nucleotides
GFF742 - hypothetical protein, at 790,345 to 790,953
GFF742
GFF743 - hypothetical protein, at 791,031 to 791,372
GFF743
GFF744 - Acyl-CoA dehydrogenase, at 791,540 to 792,712
GFF744
GFF745 - hypothetical protein, at 792,841 to 793,944
GFF745
Position (kb) 791
792
793 Strain fitness (log2 ratio) -2
-1
0
1 at 790.628 kb on + strand, within GFF742 at 790.628 kb on + strand, within GFF742 at 790.628 kb on + strand, within GFF742 at 790.629 kb on - strand, within GFF742 at 790.629 kb on - strand, within GFF742 at 790.681 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.882 kb on + strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.883 kb on - strand, within GFF742 at 790.888 kb on + strand, within GFF742 at 790.889 kb on - strand, within GFF742 at 790.889 kb on - strand, within GFF742 at 791.480 kb on + strand at 791.538 kb on + strand at 791.539 kb on - strand at 791.613 kb on + strand at 791.614 kb on - strand at 791.791 kb on - strand, within GFF744 at 791.796 kb on + strand, within GFF744 at 791.796 kb on + strand, within GFF744 at 791.796 kb on + strand, within GFF744 at 791.796 kb on + strand, within GFF744 at 791.796 kb on + strand, within GFF744 at 791.797 kb on - strand, within GFF744 at 791.797 kb on - strand, within GFF744 at 791.797 kb on - strand, within GFF744 at 791.823 kb on + strand, within GFF744 at 791.823 kb on + strand, within GFF744 at 791.823 kb on + strand, within GFF744 at 791.823 kb on + strand, within GFF744 at 791.823 kb on + strand, within GFF744 at 791.824 kb on - strand, within GFF744 at 791.898 kb on + strand, within GFF744 at 791.898 kb on + strand, within GFF744 at 791.899 kb on - strand, within GFF744 at 791.899 kb on - strand, within GFF744 at 792.183 kb on + strand, within GFF744 at 792.247 kb on - strand, within GFF744 at 792.513 kb on + strand, within GFF744 at 792.513 kb on + strand, within GFF744 at 792.514 kb on - strand, within GFF744 at 793.124 kb on + strand, within GFF745 at 793.125 kb on - strand, within GFF745 at 793.289 kb on + strand, within GFF745 at 793.290 kb on - strand, within GFF745 at 793.383 kb on - strand, within GFF745 at 793.383 kb on - strand, within GFF745 at 793.421 kb on + strand, within GFF745 at 793.422 kb on - strand, within GFF745 at 793.547 kb on + strand, within GFF745 at 793.548 kb on - strand, within GFF745
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 790,628 + GFF742 0.46 -0.5 790,628 + GFF742 0.46 +0.1 790,628 + GFF742 0.46 -1.3 790,629 - GFF742 0.47 -0.1 790,629 - GFF742 0.47 +0.4 790,681 + GFF742 0.55 +1.0 790,882 + GFF742 0.88 -0.2 790,882 + GFF742 0.88 +0.9 790,882 + GFF742 0.88 +0.5 790,882 + GFF742 0.88 +0.6 790,882 + GFF742 0.88 +0.9 790,882 + GFF742 0.88 +0.7 790,883 - GFF742 0.88 -0.1 790,883 - GFF742 0.88 +1.0 790,883 - GFF742 0.88 +0.0 790,883 - GFF742 0.88 +0.1 790,883 - GFF742 0.88 +1.1 790,883 - GFF742 0.88 -1.0 790,883 - GFF742 0.88 +0.9 790,883 - GFF742 0.88 -0.3 790,888 + GFF742 0.89 -1.2 790,889 - GFF742 0.89 -0.0 790,889 - GFF742 0.89 +0.4 791,480 + -1.1 791,538 + -0.0 791,539 - -0.4 791,613 + +0.4 791,614 - +0.1 791,791 - GFF744 0.21 +0.3 791,796 + GFF744 0.22 -1.6 791,796 + GFF744 0.22 -0.9 791,796 + GFF744 0.22 +0.2 791,796 + GFF744 0.22 +0.3 791,796 + GFF744 0.22 +0.4 791,797 - GFF744 0.22 -0.2 791,797 - GFF744 0.22 +0.3 791,797 - GFF744 0.22 -0.1 791,823 + GFF744 0.24 -0.0 791,823 + GFF744 0.24 +0.4 791,823 + GFF744 0.24 +0.4 791,823 + GFF744 0.24 +0.4 791,823 + GFF744 0.24 -2.0 791,824 - GFF744 0.24 -0.6 791,898 + GFF744 0.31 -0.6 791,898 + GFF744 0.31 -0.1 791,899 - GFF744 0.31 +0.9 791,899 - GFF744 0.31 -1.5 792,183 + GFF744 0.55 -0.6 792,247 - GFF744 0.60 -0.6 792,513 + GFF744 0.83 -0.9 792,513 + GFF744 0.83 -1.2 792,514 - GFF744 0.83 +0.7 793,124 + GFF745 0.26 +0.3 793,125 - GFF745 0.26 +0.3 793,289 + GFF745 0.41 -0.2 793,290 - GFF745 0.41 -0.5 793,383 - GFF745 0.49 +0.2 793,383 - GFF745 0.49 -0.1 793,421 + GFF745 0.53 +1.0 793,422 - GFF745 0.53 +1.3 793,547 + GFF745 0.64 +1.3 793,548 - GFF745 0.64 -1.3
Or see this region's nucleotide sequence