Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF736 and GFF737 are separated by 303 nucleotides GFF737 and GFF738 are separated by 161 nucleotides GFF738 and GFF739 are separated by 76 nucleotides
GFF736 - High-affinity branched-chain amino acid transport system permease protein LivH, at 782,243 to 783,160
GFF736
GFF737 - hypothetical protein, at 783,464 to 784,588
GFF737
GFF738 - Carbon monoxide dehydrogenase small chain, at 784,750 to 785,268
GFF738
GFF739 - Carbon monoxide dehydrogenase large chain, at 785,345 to 787,723
GFF739
Position (kb) 783
784
785 Strain fitness (log2 ratio) -1
0
1
2 at 782.490 kb on + strand, within GFF736 at 782.493 kb on + strand, within GFF736 at 782.493 kb on + strand, within GFF736 at 782.494 kb on - strand, within GFF736 at 782.494 kb on - strand, within GFF736 at 782.494 kb on - strand, within GFF736 at 782.502 kb on + strand, within GFF736 at 782.503 kb on - strand, within GFF736 at 782.503 kb on - strand, within GFF736 at 782.503 kb on - strand, within GFF736 at 782.653 kb on - strand, within GFF736 at 782.706 kb on + strand, within GFF736 at 782.707 kb on - strand, within GFF736 at 782.724 kb on + strand, within GFF736 at 782.724 kb on + strand, within GFF736 at 782.724 kb on + strand, within GFF736 at 782.965 kb on + strand, within GFF736 at 782.965 kb on + strand, within GFF736 at 782.965 kb on + strand, within GFF736 at 782.966 kb on - strand, within GFF736 at 783.108 kb on + strand at 783.109 kb on - strand at 783.317 kb on + strand at 783.350 kb on + strand at 783.674 kb on + strand, within GFF737 at 783.674 kb on + strand, within GFF737 at 783.675 kb on - strand, within GFF737 at 783.980 kb on + strand, within GFF737 at 783.981 kb on - strand, within GFF737 at 784.263 kb on - strand, within GFF737 at 784.263 kb on - strand, within GFF737 at 784.430 kb on + strand, within GFF737 at 784.431 kb on - strand, within GFF737 at 785.172 kb on + strand, within GFF738 at 785.173 kb on - strand, within GFF738 at 785.173 kb on - strand, within GFF738 at 785.173 kb on - strand, within GFF738 at 785.173 kb on - strand, within GFF738 at 785.173 kb on - strand, within GFF738 at 785.198 kb on - strand, within GFF738 at 785.267 kb on - strand at 785.308 kb on + strand at 785.308 kb on + strand at 785.309 kb on - strand at 785.309 kb on - strand at 785.468 kb on + strand at 785.468 kb on + strand at 785.468 kb on + strand at 785.469 kb on - strand at 785.474 kb on + strand at 785.475 kb on - strand at 785.475 kb on - strand at 785.475 kb on - strand at 785.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 782,490 + GFF736 0.27 -0.6 782,493 + GFF736 0.27 +0.6 782,493 + GFF736 0.27 -1.4 782,494 - GFF736 0.27 +0.7 782,494 - GFF736 0.27 +0.4 782,494 - GFF736 0.27 +0.0 782,502 + GFF736 0.28 -0.4 782,503 - GFF736 0.28 +0.6 782,503 - GFF736 0.28 +0.7 782,503 - GFF736 0.28 -0.5 782,653 - GFF736 0.45 -0.8 782,706 + GFF736 0.50 -0.2 782,707 - GFF736 0.51 -0.2 782,724 + GFF736 0.52 -0.1 782,724 + GFF736 0.52 +0.8 782,724 + GFF736 0.52 -0.7 782,965 + GFF736 0.79 -1.0 782,965 + GFF736 0.79 +0.1 782,965 + GFF736 0.79 -0.1 782,966 - GFF736 0.79 +0.4 783,108 + -0.3 783,109 - -0.4 783,317 + +0.6 783,350 + -0.1 783,674 + GFF737 0.19 +1.0 783,674 + GFF737 0.19 -0.4 783,675 - GFF737 0.19 +0.6 783,980 + GFF737 0.46 +0.3 783,981 - GFF737 0.46 +0.2 784,263 - GFF737 0.71 +0.3 784,263 - GFF737 0.71 +1.4 784,430 + GFF737 0.86 +0.2 784,431 - GFF737 0.86 +0.7 785,172 + GFF738 0.81 -0.2 785,173 - GFF738 0.82 +0.0 785,173 - GFF738 0.82 -0.7 785,173 - GFF738 0.82 -0.1 785,173 - GFF738 0.82 -0.1 785,173 - GFF738 0.82 -1.0 785,198 - GFF738 0.86 +0.6 785,267 - +0.4 785,308 + -0.1 785,308 + -0.5 785,309 - +2.0 785,309 - -0.5 785,468 + -0.6 785,468 + -0.4 785,468 + -0.4 785,469 - +0.0 785,474 + +1.0 785,475 - -0.3 785,475 - -1.0 785,475 - -0.7 785,493 - -0.0
Or see this region's nucleotide sequence