Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF685 and GFF686 are separated by 132 nucleotides GFF686 and GFF687 are separated by 135 nucleotides
GFF685 - hypothetical protein, at 734,211 to 735,014
GFF685
GFF686 - hypothetical protein, at 735,147 to 736,241
GFF686
GFF687 - hypothetical protein, at 736,377 to 737,036
GFF687
Position (kb) 735
736
737 Strain fitness (log2 ratio) -2
-1
0
1 at 734.171 kb on + strand at 734.171 kb on + strand at 734.172 kb on - strand at 734.277 kb on + strand at 734.277 kb on + strand at 734.278 kb on - strand at 734.580 kb on + strand, within GFF685 at 734.676 kb on + strand, within GFF685 at 734.676 kb on + strand, within GFF685 at 734.677 kb on - strand, within GFF685 at 734.694 kb on + strand, within GFF685 at 734.694 kb on + strand, within GFF685 at 734.694 kb on + strand, within GFF685 at 734.695 kb on - strand, within GFF685 at 734.695 kb on - strand, within GFF685 at 734.695 kb on - strand, within GFF685 at 734.940 kb on + strand at 734.940 kb on + strand at 734.940 kb on + strand at 734.940 kb on + strand at 734.940 kb on + strand at 734.941 kb on - strand at 734.941 kb on - strand at 735.042 kb on + strand at 735.043 kb on - strand at 735.043 kb on - strand at 735.276 kb on + strand, within GFF686 at 735.277 kb on - strand, within GFF686 at 735.387 kb on + strand, within GFF686 at 735.388 kb on - strand, within GFF686 at 735.388 kb on - strand, within GFF686 at 735.471 kb on + strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.472 kb on - strand, within GFF686 at 735.696 kb on + strand, within GFF686 at 735.870 kb on + strand, within GFF686 at 735.871 kb on - strand, within GFF686 at 736.466 kb on + strand, within GFF687 at 736.543 kb on + strand, within GFF687 at 736.625 kb on - strand, within GFF687 at 736.766 kb on - strand, within GFF687 at 736.852 kb on + strand, within GFF687 at 736.852 kb on + strand, within GFF687 at 736.971 kb on - strand at 736.989 kb on + strand at 736.989 kb on + strand at 736.990 kb on - strand at 736.990 kb on - strand at 736.990 kb on - strand at 736.990 kb on - strand at 737.028 kb on + strand at 737.028 kb on + strand at 737.029 kb on - strand at 737.029 kb on - strand at 737.095 kb on + strand at 737.149 kb on + strand at 737.179 kb on + strand at 737.188 kb on - strand at 737.188 kb on - strand at 737.233 kb on + strand at 737.233 kb on + strand at 737.233 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 734,171 + -0.4 734,171 + +0.0 734,172 - -0.0 734,277 + -0.8 734,277 + -0.8 734,278 - -1.0 734,580 + GFF685 0.46 +1.1 734,676 + GFF685 0.58 +0.6 734,676 + GFF685 0.58 -0.6 734,677 - GFF685 0.58 +0.0 734,694 + GFF685 0.60 -1.2 734,694 + GFF685 0.60 -0.6 734,694 + GFF685 0.60 -1.8 734,695 - GFF685 0.60 -0.0 734,695 - GFF685 0.60 +0.1 734,695 - GFF685 0.60 -0.7 734,940 + -1.1 734,940 + -0.3 734,940 + +0.1 734,940 + -0.8 734,940 + -0.4 734,941 - -0.1 734,941 - +0.2 735,042 + -0.4 735,043 - +0.9 735,043 - +0.6 735,276 + GFF686 0.12 +1.7 735,277 - GFF686 0.12 +0.7 735,387 + GFF686 0.22 +0.4 735,388 - GFF686 0.22 -0.2 735,388 - GFF686 0.22 -0.3 735,471 + GFF686 0.30 -0.3 735,472 - GFF686 0.30 +0.5 735,472 - GFF686 0.30 -0.0 735,472 - GFF686 0.30 +0.8 735,696 + GFF686 0.50 +1.2 735,870 + GFF686 0.66 -0.8 735,871 - GFF686 0.66 +0.2 736,466 + GFF687 0.13 -0.6 736,543 + GFF687 0.25 +0.2 736,625 - GFF687 0.38 -0.5 736,766 - GFF687 0.59 -0.4 736,852 + GFF687 0.72 +0.1 736,852 + GFF687 0.72 -0.5 736,971 - +0.2 736,989 + +0.2 736,989 + -1.2 736,990 - -2.0 736,990 - -0.5 736,990 - -0.6 736,990 - -0.9 737,028 + -1.4 737,028 + +0.2 737,029 - +0.6 737,029 - +0.9 737,095 + +0.3 737,149 + -0.3 737,179 + +1.0 737,188 - -0.0 737,188 - +0.1 737,233 + +0.5 737,233 + -0.6 737,233 + +0.0
Or see this region's nucleotide sequence