Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF673 and GFF674 overlap by 4 nucleotides GFF674 and GFF675 are separated by 13 nucleotides GFF675 and GFF676 are separated by 64 nucleotides
GFF673 - Maltose regulon regulatory protein MalI, at 723,611 to 724,735
GFF673
GFF674 - Glutamine transport system permease protein GlnP, at 724,732 to 725,406
GFF674
GFF675 - L-cystine transport system permease protein YecS, at 725,420 to 726,073
GFF675
GFF676 - ABC transporter glutamine-binding protein GlnH, at 726,138 to 726,953
GFF676
Position (kb) 724
725
726 Strain fitness (log2 ratio) -1
0
1 at 723.852 kb on - strand, within GFF673 at 723.852 kb on - strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.980 kb on + strand, within GFF673 at 723.981 kb on - strand, within GFF673 at 724.178 kb on + strand, within GFF673 at 724.179 kb on - strand, within GFF673 at 724.179 kb on - strand, within GFF673 at 724.386 kb on - strand, within GFF673 at 724.442 kb on + strand, within GFF673 at 724.443 kb on - strand, within GFF673 at 724.443 kb on - strand, within GFF673 at 724.663 kb on - strand at 724.738 kb on + strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.739 kb on - strand at 724.782 kb on - strand at 724.782 kb on - strand at 724.782 kb on - strand at 724.909 kb on + strand, within GFF674 at 724.909 kb on + strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 724.910 kb on - strand, within GFF674 at 725.042 kb on - strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.140 kb on + strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.141 kb on - strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.302 kb on + strand, within GFF674 at 725.305 kb on - strand, within GFF674 at 725.324 kb on - strand, within GFF674 at 725.368 kb on + strand at 725.369 kb on - strand at 725.369 kb on - strand at 725.585 kb on + strand, within GFF675 at 725.585 kb on + strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.586 kb on - strand, within GFF675 at 725.798 kb on + strand, within GFF675 at 725.798 kb on + strand, within GFF675 at 725.798 kb on + strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.799 kb on - strand, within GFF675 at 725.999 kb on + strand, within GFF675 at 726.000 kb on - strand, within GFF675 at 726.000 kb on - strand, within GFF675 at 726.029 kb on + strand at 726.030 kb on - strand at 726.030 kb on - strand at 726.131 kb on + strand at 726.339 kb on + strand, within GFF676 at 726.340 kb on - strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.373 kb on - strand, within GFF676
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 723,852 - GFF673 0.21 +0.1 723,852 - GFF673 0.21 -0.1 723,980 + GFF673 0.33 +0.4 723,980 + GFF673 0.33 +0.6 723,980 + GFF673 0.33 -0.2 723,980 + GFF673 0.33 -0.6 723,981 - GFF673 0.33 +0.5 724,178 + GFF673 0.50 -0.3 724,179 - GFF673 0.50 +0.2 724,179 - GFF673 0.50 -0.0 724,386 - GFF673 0.69 -0.1 724,442 + GFF673 0.74 +0.5 724,443 - GFF673 0.74 +0.5 724,443 - GFF673 0.74 +0.7 724,663 - -1.0 724,738 + +0.4 724,739 - -0.2 724,739 - -0.8 724,739 - -0.0 724,739 - +0.7 724,782 - -0.5 724,782 - +1.0 724,782 - -0.0 724,909 + GFF674 0.26 +0.1 724,909 + GFF674 0.26 +0.4 724,910 - GFF674 0.26 -0.9 724,910 - GFF674 0.26 -0.3 724,910 - GFF674 0.26 +0.2 724,910 - GFF674 0.26 +0.4 724,910 - GFF674 0.26 +0.6 725,042 - GFF674 0.46 +0.2 725,140 + GFF674 0.60 -0.4 725,140 + GFF674 0.60 -1.5 725,140 + GFF674 0.60 +0.2 725,140 + GFF674 0.60 -0.0 725,141 - GFF674 0.61 -0.1 725,141 - GFF674 0.61 +0.2 725,141 - GFF674 0.61 -0.8 725,141 - GFF674 0.61 +0.5 725,302 + GFF674 0.84 -0.3 725,302 + GFF674 0.84 -0.1 725,302 + GFF674 0.84 +0.1 725,302 + GFF674 0.84 -0.4 725,305 - GFF674 0.85 -0.8 725,324 - GFF674 0.88 +0.5 725,368 + -0.1 725,369 - -0.6 725,369 - +0.6 725,585 + GFF675 0.25 +0.6 725,585 + GFF675 0.25 +0.8 725,586 - GFF675 0.25 +0.2 725,586 - GFF675 0.25 -0.4 725,586 - GFF675 0.25 +0.3 725,586 - GFF675 0.25 +0.2 725,798 + GFF675 0.58 +0.3 725,798 + GFF675 0.58 -0.8 725,798 + GFF675 0.58 -0.2 725,799 - GFF675 0.58 -0.0 725,799 - GFF675 0.58 +0.1 725,799 - GFF675 0.58 -0.4 725,799 - GFF675 0.58 -0.4 725,799 - GFF675 0.58 +0.7 725,799 - GFF675 0.58 -0.6 725,799 - GFF675 0.58 -0.6 725,799 - GFF675 0.58 -0.5 725,999 + GFF675 0.89 -0.4 726,000 - GFF675 0.89 +0.7 726,000 - GFF675 0.89 -0.2 726,029 + -1.6 726,030 - -1.3 726,030 - +0.5 726,131 + +0.9 726,339 + GFF676 0.25 +0.1 726,340 - GFF676 0.25 +0.5 726,372 + GFF676 0.29 +0.2 726,372 + GFF676 0.29 -1.4 726,372 + GFF676 0.29 +0.4 726,373 - GFF676 0.29 -0.1
Or see this region's nucleotide sequence