Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF496 and GFF497 are separated by 94 nucleotides GFF497 and GFF498 are separated by 14 nucleotides
GFF496 - Long-chain-fatty-acid--CoA ligase, at 526,640 to 528,196
GFF496
GFF497 - hypothetical protein, at 528,291 to 529,043
GFF497
GFF498 - Leu/Ile/Val-binding protein, at 529,058 to 530,218
GFF498
Position (kb) 528
529
530 Strain fitness (log2 ratio) -1
0
1 at 527.370 kb on + strand, within GFF496 at 527.388 kb on + strand, within GFF496 at 527.389 kb on - strand, within GFF496 at 527.389 kb on - strand, within GFF496 at 527.392 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.486 kb on - strand, within GFF496 at 527.491 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496 at 527.578 kb on - strand, within GFF496 at 527.652 kb on + strand, within GFF496 at 527.652 kb on + strand, within GFF496 at 527.653 kb on - strand, within GFF496 at 527.653 kb on - strand, within GFF496 at 527.655 kb on + strand, within GFF496 at 527.655 kb on + strand, within GFF496 at 527.655 kb on + strand, within GFF496 at 527.656 kb on - strand, within GFF496 at 527.730 kb on + strand, within GFF496 at 527.730 kb on + strand, within GFF496 at 527.730 kb on + strand, within GFF496 at 527.730 kb on + strand, within GFF496 at 527.731 kb on - strand, within GFF496 at 527.731 kb on - strand, within GFF496 at 527.803 kb on - strand, within GFF496 at 527.803 kb on - strand, within GFF496 at 528.115 kb on + strand at 528.115 kb on + strand at 528.116 kb on - strand at 528.125 kb on + strand at 528.126 kb on + strand at 528.127 kb on - strand at 528.281 kb on + strand at 528.281 kb on + strand at 528.281 kb on + strand at 528.282 kb on - strand at 528.340 kb on + strand at 528.341 kb on - strand at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.681 kb on + strand, within GFF497 at 528.694 kb on - strand, within GFF497 at 528.797 kb on + strand, within GFF497 at 528.798 kb on - strand, within GFF497 at 529.190 kb on - strand, within GFF498 at 529.272 kb on + strand, within GFF498 at 529.467 kb on + strand, within GFF498 at 529.491 kb on + strand, within GFF498 at 529.492 kb on - strand, within GFF498 at 529.701 kb on + strand, within GFF498 at 529.702 kb on - strand, within GFF498 at 529.740 kb on + strand, within GFF498 at 529.740 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.977 kb on + strand, within GFF498 at 529.978 kb on - strand, within GFF498 at 529.978 kb on - strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498 at 530.019 kb on + strand, within GFF498
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 527,370 + GFF496 0.47 -0.4 527,388 + GFF496 0.48 -0.9 527,389 - GFF496 0.48 -0.1 527,389 - GFF496 0.48 -0.3 527,392 - GFF496 0.48 -0.0 527,486 - GFF496 0.54 +1.5 527,486 - GFF496 0.54 +0.7 527,486 - GFF496 0.54 +0.3 527,486 - GFF496 0.54 -0.3 527,486 - GFF496 0.54 +0.5 527,486 - GFF496 0.54 -0.7 527,491 - GFF496 0.55 +1.0 527,578 - GFF496 0.60 -0.2 527,578 - GFF496 0.60 -1.0 527,578 - GFF496 0.60 +0.2 527,652 + GFF496 0.65 +0.7 527,652 + GFF496 0.65 +0.1 527,653 - GFF496 0.65 -0.1 527,653 - GFF496 0.65 +0.2 527,655 + GFF496 0.65 -0.2 527,655 + GFF496 0.65 +0.7 527,655 + GFF496 0.65 +0.2 527,656 - GFF496 0.65 +0.0 527,730 + GFF496 0.70 -0.3 527,730 + GFF496 0.70 +0.2 527,730 + GFF496 0.70 -0.8 527,730 + GFF496 0.70 -0.8 527,731 - GFF496 0.70 -0.4 527,731 - GFF496 0.70 +1.2 527,803 - GFF496 0.75 -1.2 527,803 - GFF496 0.75 -1.1 528,115 + +0.0 528,115 + +0.2 528,116 - +0.2 528,125 + -0.2 528,126 + -0.2 528,127 - -0.4 528,281 + -0.1 528,281 + -0.1 528,281 + -0.2 528,282 - +0.6 528,340 + -1.3 528,341 - -0.4 528,681 + GFF497 0.52 -0.8 528,681 + GFF497 0.52 +0.7 528,681 + GFF497 0.52 +0.3 528,681 + GFF497 0.52 +0.1 528,681 + GFF497 0.52 +0.5 528,694 - GFF497 0.54 +1.0 528,797 + GFF497 0.67 +1.6 528,798 - GFF497 0.67 +1.0 529,190 - GFF498 0.11 -0.5 529,272 + GFF498 0.18 +0.5 529,467 + GFF498 0.35 +0.0 529,491 + GFF498 0.37 -0.1 529,492 - GFF498 0.37 +0.2 529,701 + GFF498 0.55 +0.4 529,702 - GFF498 0.55 -0.6 529,740 + GFF498 0.59 -0.9 529,740 + GFF498 0.59 +0.1 529,977 + GFF498 0.79 +0.3 529,977 + GFF498 0.79 -0.4 529,977 + GFF498 0.79 +0.3 529,977 + GFF498 0.79 -0.3 529,978 - GFF498 0.79 +0.9 529,978 - GFF498 0.79 +0.3 530,019 + GFF498 0.83 -0.3 530,019 + GFF498 0.83 -1.0 530,019 + GFF498 0.83 -0.3 530,019 + GFF498 0.83 -0.0 530,019 + GFF498 0.83 -0.5
Or see this region's nucleotide sequence