Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4920 and GFF4921 are separated by 339 nucleotides GFF4921 and GFF4922 are separated by 90 nucleotides
GFF4920 - hypothetical protein, at 26,126 to 27,046
GFF4920
GFF4921 - hypothetical protein, at 27,386 to 28,423
GFF4921
GFF4922 - hypothetical protein, at 28,514 to 30,577
GFF4922
Position (kb) 27
28
29 Strain fitness (log2 ratio) -2
-1
0
1 at 26.791 kb on + strand, within GFF4920 at 26.977 kb on - strand at 26.977 kb on - strand at 27.327 kb on + strand at 27.600 kb on + strand, within GFF4921 at 27.600 kb on + strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.930 kb on + strand, within GFF4921 at 27.930 kb on + strand, within GFF4921 at 27.931 kb on - strand, within GFF4921 at 27.931 kb on - strand, within GFF4921 at 27.933 kb on + strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 28.007 kb on + strand, within GFF4921 at 28.281 kb on - strand, within GFF4921 at 28.326 kb on + strand at 28.356 kb on + strand at 28.356 kb on + strand at 28.356 kb on + strand at 28.515 kb on + strand at 28.558 kb on + strand at 28.979 kb on + strand, within GFF4922 at 28.979 kb on + strand, within GFF4922 at 28.979 kb on + strand, within GFF4922 at 28.979 kb on + strand, within GFF4922 at 28.980 kb on - strand, within GFF4922 at 28.980 kb on - strand, within GFF4922 at 29.128 kb on + strand, within GFF4922 at 29.129 kb on - strand, within GFF4922 at 29.139 kb on + strand, within GFF4922 at 29.145 kb on + strand, within GFF4922 at 29.145 kb on + strand, within GFF4922 at 29.146 kb on - strand, within GFF4922 at 29.190 kb on - strand, within GFF4922 at 29.190 kb on - strand, within GFF4922 at 29.190 kb on - strand, within GFF4922 at 29.256 kb on - strand, within GFF4922 at 29.421 kb on + strand, within GFF4922 at 29.421 kb on + strand, within GFF4922 at 29.421 kb on + strand, within GFF4922
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 26,791 + GFF4920 0.72 +0.5 26,977 - -0.7 26,977 - -0.8 27,327 + -0.2 27,600 + GFF4921 0.21 +0.0 27,600 + GFF4921 0.21 +0.8 27,601 - GFF4921 0.21 +0.8 27,601 - GFF4921 0.21 +0.0 27,601 - GFF4921 0.21 +0.1 27,930 + GFF4921 0.52 -2.0 27,930 + GFF4921 0.52 +0.6 27,931 - GFF4921 0.53 +0.1 27,931 - GFF4921 0.53 -0.7 27,933 + GFF4921 0.53 +0.3 27,934 - GFF4921 0.53 +0.3 27,934 - GFF4921 0.53 +0.5 27,934 - GFF4921 0.53 +1.0 27,934 - GFF4921 0.53 +0.7 27,999 + GFF4921 0.59 +0.4 27,999 + GFF4921 0.59 +1.0 27,999 + GFF4921 0.59 -1.1 28,007 + GFF4921 0.60 +0.2 28,281 - GFF4921 0.86 -0.2 28,326 + +1.1 28,356 + +0.8 28,356 + +0.1 28,356 + -0.1 28,515 + +0.3 28,558 + +0.4 28,979 + GFF4922 0.23 +0.1 28,979 + GFF4922 0.23 -0.7 28,979 + GFF4922 0.23 -0.7 28,979 + GFF4922 0.23 -0.4 28,980 - GFF4922 0.23 -0.1 28,980 - GFF4922 0.23 -0.4 29,128 + GFF4922 0.30 -0.9 29,129 - GFF4922 0.30 -0.4 29,139 + GFF4922 0.30 -0.6 29,145 + GFF4922 0.31 +0.3 29,145 + GFF4922 0.31 -1.5 29,146 - GFF4922 0.31 -0.6 29,190 - GFF4922 0.33 +0.5 29,190 - GFF4922 0.33 -0.3 29,190 - GFF4922 0.33 +0.2 29,256 - GFF4922 0.36 +0.7 29,421 + GFF4922 0.44 -0.2 29,421 + GFF4922 0.44 +0.0 29,421 + GFF4922 0.44 +0.0
Or see this region's nucleotide sequence