Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4902 and GFF4903 are separated by 124 nucleotides GFF4903 and GFF4904 are separated by 38 nucleotides GFF4904 and GFF4905 are separated by 13 nucleotides GFF4905 and GFF4906 are separated by 310 nucleotides
GFF4902 - Multidrug resistance protein MdtH, at 5,716 to 6,942
GFF4902
GFF4903 - hypothetical protein, at 7,067 to 7,183
GFF4903
GFF4904 - hypothetical protein, at 7,222 to 8,367
GFF4904
GFF4905 - Transcriptional repressor FrmR, at 8,381 to 8,659
GFF4905
GFF4906 - Silver exporting P-type ATPase, at 8,970 to 11,366
GFF4906
Position (kb) 7
8
9 Strain fitness (log2 ratio) -1
0
1 at 6.762 kb on + strand, within GFF4902 at 6.762 kb on + strand, within GFF4902 at 7.080 kb on + strand, within GFF4903 at 7.176 kb on + strand at 7.177 kb on - strand at 7.177 kb on - strand at 7.242 kb on + strand at 7.242 kb on + strand at 7.242 kb on + strand at 7.243 kb on - strand at 7.243 kb on - strand at 7.310 kb on + strand at 7.310 kb on + strand at 7.310 kb on + strand at 7.310 kb on + strand at 7.311 kb on - strand at 7.311 kb on - strand at 7.346 kb on + strand, within GFF4904 at 7.346 kb on + strand, within GFF4904 at 7.346 kb on + strand, within GFF4904 at 7.347 kb on - strand, within GFF4904 at 7.347 kb on - strand, within GFF4904 at 7.347 kb on - strand, within GFF4904 at 8.096 kb on + strand, within GFF4904 at 8.135 kb on + strand, within GFF4904 at 8.135 kb on + strand, within GFF4904 at 8.135 kb on + strand, within GFF4904 at 8.136 kb on - strand, within GFF4904 at 8.392 kb on - strand at 8.392 kb on - strand at 8.392 kb on - strand at 8.392 kb on - strand at 8.638 kb on + strand at 8.639 kb on - strand at 8.650 kb on + strand at 8.651 kb on - strand at 8.676 kb on - strand at 8.971 kb on + strand at 8.972 kb on - strand at 8.972 kb on - strand at 9.091 kb on + strand at 9.092 kb on - strand at 9.130 kb on + strand at 9.130 kb on + strand at 9.131 kb on - strand at 9.131 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 6,762 + GFF4902 0.85 +0.5 6,762 + GFF4902 0.85 -0.1 7,080 + GFF4903 0.11 -0.3 7,176 + -1.0 7,177 - -0.5 7,177 - +1.3 7,242 + +0.4 7,242 + -0.2 7,242 + +1.3 7,243 - +0.6 7,243 - -0.3 7,310 + +0.8 7,310 + -0.1 7,310 + -1.0 7,310 + -0.1 7,311 - +0.2 7,311 - +1.3 7,346 + GFF4904 0.11 -1.1 7,346 + GFF4904 0.11 +0.1 7,346 + GFF4904 0.11 -0.4 7,347 - GFF4904 0.11 +0.0 7,347 - GFF4904 0.11 -0.4 7,347 - GFF4904 0.11 +0.6 8,096 + GFF4904 0.76 -0.1 8,135 + GFF4904 0.80 +0.4 8,135 + GFF4904 0.80 -0.0 8,135 + GFF4904 0.80 +0.6 8,136 - GFF4904 0.80 +0.8 8,392 - -0.6 8,392 - -0.1 8,392 - +0.4 8,392 - +0.2 8,638 + +0.4 8,639 - -1.0 8,650 + -1.4 8,651 - +0.1 8,676 - +0.1 8,971 + +0.3 8,972 - +0.1 8,972 - +0.0 9,091 + -0.4 9,092 - +0.8 9,130 + +0.9 9,130 + -0.2 9,131 - -0.8 9,131 - +0.0
Or see this region's nucleotide sequence