Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4858 and GFF4859 are separated by 502 nucleotides GFF4859 and GFF4860 are separated by 62 nucleotides GFF4860 and GFF4861 are separated by 49 nucleotides
GFF4858 - hypothetical protein, at 13,724 to 14,311
GFF4858
GFF4859 - Protein HesB, heterocyst, at 14,814 to 15,134
GFF4859
GFF4860 - hypothetical protein, at 15,197 to 15,598
GFF4860
GFF4861 - Cysteine desulfurase NifS, at 15,648 to 16,847
GFF4861
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1
2 at 13.941 kb on + strand, within GFF4858 at 13.942 kb on - strand, within GFF4858 at 13.942 kb on - strand, within GFF4858 at 13.972 kb on - strand, within GFF4858 at 13.982 kb on + strand, within GFF4858 at 14.010 kb on + strand, within GFF4858 at 14.082 kb on + strand, within GFF4858 at 14.083 kb on - strand, within GFF4858 at 14.083 kb on - strand, within GFF4858 at 14.148 kb on + strand, within GFF4858 at 14.149 kb on - strand, within GFF4858 at 14.272 kb on + strand at 14.273 kb on - strand at 14.925 kb on + strand, within GFF4859 at 14.931 kb on + strand, within GFF4859 at 14.931 kb on + strand, within GFF4859 at 14.932 kb on - strand, within GFF4859 at 15.190 kb on + strand at 15.190 kb on + strand at 15.190 kb on + strand at 15.190 kb on + strand at 15.191 kb on - strand at 15.191 kb on - strand at 15.191 kb on - strand at 15.660 kb on + strand at 15.660 kb on + strand at 15.661 kb on - strand at 15.661 kb on - strand at 15.661 kb on - strand at 15.849 kb on + strand, within GFF4861 at 15.849 kb on + strand, within GFF4861 at 15.849 kb on + strand, within GFF4861 at 15.849 kb on + strand, within GFF4861 at 15.849 kb on + strand, within GFF4861
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 13,941 + GFF4858 0.37 +1.8 13,942 - GFF4858 0.37 +0.6 13,942 - GFF4858 0.37 -0.8 13,972 - GFF4858 0.42 -0.5 13,982 + GFF4858 0.44 +0.2 14,010 + GFF4858 0.49 +0.4 14,082 + GFF4858 0.61 +0.8 14,083 - GFF4858 0.61 +0.3 14,083 - GFF4858 0.61 +0.3 14,148 + GFF4858 0.72 +0.4 14,149 - GFF4858 0.72 +0.3 14,272 + -0.1 14,273 - +0.3 14,925 + GFF4859 0.35 -0.4 14,931 + GFF4859 0.36 +0.9 14,931 + GFF4859 0.36 -0.7 14,932 - GFF4859 0.37 +1.4 15,190 + +0.7 15,190 + +0.4 15,190 + -0.2 15,190 + -0.3 15,191 - +0.7 15,191 - +0.2 15,191 - +0.1 15,660 + -0.7 15,660 + +0.5 15,661 - +0.6 15,661 - +0.2 15,661 - +0.0 15,849 + GFF4861 0.17 +0.1 15,849 + GFF4861 0.17 -0.9 15,849 + GFF4861 0.17 +0.1 15,849 + GFF4861 0.17 -0.6 15,849 + GFF4861 0.17 +0.3
Or see this region's nucleotide sequence