Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4830 and GFF4831 overlap by 4 nucleotides GFF4831 and GFF4832 overlap by 13 nucleotides GFF4832 and GFF4833 are separated by 5 nucleotides
GFF4830 - hypothetical protein, at 70,086 to 71,294
GFF4830
GFF4831 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 71,291 to 71,725
GFF4831
GFF4832 - hypothetical protein, at 71,713 to 72,201
GFF4832
GFF4833 - Adaptive-response sensory-kinase SasA, at 72,207 to 73,943
GFF4833
Position (kb) 71
72 Strain fitness (log2 ratio) -2
-1
0
1 at 70.342 kb on - strand, within GFF4830 at 70.455 kb on - strand, within GFF4830 at 70.638 kb on + strand, within GFF4830 at 70.704 kb on + strand, within GFF4830 at 70.705 kb on - strand, within GFF4830 at 70.705 kb on - strand, within GFF4830 at 70.890 kb on + strand, within GFF4830 at 70.891 kb on - strand, within GFF4830 at 70.891 kb on - strand, within GFF4830 at 70.941 kb on + strand, within GFF4830 at 70.941 kb on + strand, within GFF4830 at 71.008 kb on - strand, within GFF4830 at 71.052 kb on + strand, within GFF4830 at 71.053 kb on - strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.060 kb on + strand, within GFF4830 at 71.061 kb on - strand, within GFF4830 at 71.061 kb on - strand, within GFF4830 at 71.061 kb on - strand, within GFF4830 at 71.130 kb on + strand, within GFF4830 at 71.130 kb on + strand, within GFF4830 at 71.130 kb on + strand, within GFF4830 at 71.130 kb on + strand, within GFF4830 at 71.130 kb on + strand, within GFF4830 at 71.131 kb on - strand, within GFF4830 at 71.335 kb on + strand, within GFF4831 at 71.335 kb on + strand, within GFF4831 at 71.335 kb on + strand, within GFF4831 at 71.336 kb on - strand, within GFF4831 at 71.336 kb on - strand, within GFF4831 at 71.472 kb on - strand, within GFF4831 at 71.472 kb on - strand, within GFF4831 at 71.472 kb on - strand, within GFF4831 at 71.483 kb on + strand, within GFF4831 at 71.512 kb on + strand, within GFF4831 at 71.552 kb on + strand, within GFF4831 at 71.552 kb on + strand, within GFF4831 at 71.552 kb on + strand, within GFF4831 at 71.552 kb on + strand, within GFF4831 at 71.553 kb on - strand, within GFF4831 at 71.553 kb on - strand, within GFF4831 at 71.553 kb on - strand, within GFF4831 at 71.553 kb on - strand, within GFF4831 at 71.937 kb on + strand, within GFF4832 at 72.011 kb on - strand, within GFF4832 at 72.170 kb on + strand at 72.199 kb on + strand at 72.199 kb on + strand at 72.199 kb on + strand at 72.199 kb on + strand at 72.200 kb on - strand at 72.206 kb on + strand at 72.206 kb on + strand at 72.206 kb on + strand at 72.207 kb on - strand at 72.207 kb on - strand at 72.207 kb on - strand at 72.207 kb on - strand at 72.207 kb on - strand at 72.207 kb on - strand at 72.413 kb on - strand, within GFF4833 at 72.413 kb on - strand, within GFF4833 at 72.540 kb on + strand, within GFF4833 at 72.541 kb on - strand, within GFF4833 at 72.541 kb on - strand, within GFF4833 at 72.541 kb on - strand, within GFF4833
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 70,342 - GFF4830 0.21 +0.2 70,455 - GFF4830 0.31 -0.2 70,638 + GFF4830 0.46 +1.1 70,704 + GFF4830 0.51 +0.1 70,705 - GFF4830 0.51 +1.0 70,705 - GFF4830 0.51 -0.2 70,890 + GFF4830 0.67 +0.1 70,891 - GFF4830 0.67 -0.1 70,891 - GFF4830 0.67 -0.4 70,941 + GFF4830 0.71 -0.3 70,941 + GFF4830 0.71 +0.2 71,008 - GFF4830 0.76 +0.2 71,052 + GFF4830 0.80 +0.3 71,053 - GFF4830 0.80 +0.1 71,060 + GFF4830 0.81 -0.8 71,060 + GFF4830 0.81 +0.3 71,060 + GFF4830 0.81 +0.3 71,060 + GFF4830 0.81 +0.5 71,060 + GFF4830 0.81 +0.1 71,060 + GFF4830 0.81 +0.4 71,060 + GFF4830 0.81 -0.7 71,061 - GFF4830 0.81 -1.0 71,061 - GFF4830 0.81 +0.6 71,061 - GFF4830 0.81 -0.3 71,130 + GFF4830 0.86 +0.6 71,130 + GFF4830 0.86 +0.9 71,130 + GFF4830 0.86 -1.7 71,130 + GFF4830 0.86 -1.2 71,130 + GFF4830 0.86 -1.0 71,131 - GFF4830 0.86 -0.5 71,335 + GFF4831 0.10 -0.1 71,335 + GFF4831 0.10 +0.7 71,335 + GFF4831 0.10 -0.4 71,336 - GFF4831 0.10 +0.2 71,336 - GFF4831 0.10 +0.1 71,472 - GFF4831 0.42 +0.7 71,472 - GFF4831 0.42 -0.2 71,472 - GFF4831 0.42 -1.0 71,483 + GFF4831 0.44 +0.3 71,512 + GFF4831 0.51 +0.5 71,552 + GFF4831 0.60 -1.1 71,552 + GFF4831 0.60 +0.2 71,552 + GFF4831 0.60 -0.5 71,552 + GFF4831 0.60 -1.8 71,553 - GFF4831 0.60 +0.4 71,553 - GFF4831 0.60 -1.1 71,553 - GFF4831 0.60 +1.0 71,553 - GFF4831 0.60 +0.9 71,937 + GFF4832 0.46 -0.3 72,011 - GFF4832 0.61 -0.3 72,170 + +0.2 72,199 + +0.1 72,199 + +0.4 72,199 + +1.3 72,199 + +0.4 72,200 - +0.6 72,206 + +0.2 72,206 + +0.8 72,206 + +0.6 72,207 - -0.1 72,207 - +0.0 72,207 - +0.1 72,207 - -0.3 72,207 - -0.8 72,207 - -0.7 72,413 - GFF4833 0.12 +0.6 72,413 - GFF4833 0.12 +0.2 72,540 + GFF4833 0.19 +0.3 72,541 - GFF4833 0.19 +1.2 72,541 - GFF4833 0.19 -0.7 72,541 - GFF4833 0.19 -0.9
Or see this region's nucleotide sequence