Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4826 and GFF4827 are separated by 5 nucleotides GFF4827 and GFF4828 overlap by 4 nucleotides GFF4828 and GFF4829 are separated by 8 nucleotides
GFF4826 - 5-aminovalerate aminotransferase DavT, at 66,461 to 67,870
GFF4826
GFF4827 - hypothetical protein, at 67,876 to 68,799
GFF4827
GFF4828 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 68,796 to 69,161
GFF4828
GFF4829 - Thermostable monoacylglycerol lipase, at 69,170 to 70,096
GFF4829
Position (kb) 67
68
69 Strain fitness (log2 ratio) -1
0
1 at 66.962 kb on + strand, within GFF4826 at 66.963 kb on - strand, within GFF4826 at 66.963 kb on - strand, within GFF4826 at 67.023 kb on - strand, within GFF4826 at 67.061 kb on + strand, within GFF4826 at 67.062 kb on - strand, within GFF4826 at 67.062 kb on - strand, within GFF4826 at 67.062 kb on - strand, within GFF4826 at 67.109 kb on + strand, within GFF4826 at 67.110 kb on - strand, within GFF4826 at 67.110 kb on - strand, within GFF4826 at 67.110 kb on - strand, within GFF4826 at 67.149 kb on - strand, within GFF4826 at 67.160 kb on + strand, within GFF4826 at 67.160 kb on + strand, within GFF4826 at 67.160 kb on + strand, within GFF4826 at 67.161 kb on - strand, within GFF4826 at 67.190 kb on + strand, within GFF4826 at 67.190 kb on + strand, within GFF4826 at 67.191 kb on - strand, within GFF4826 at 67.191 kb on - strand, within GFF4826 at 67.191 kb on - strand, within GFF4826 at 67.287 kb on - strand, within GFF4826 at 67.761 kb on - strand at 67.770 kb on - strand at 67.885 kb on + strand at 68.071 kb on + strand, within GFF4827 at 68.071 kb on + strand, within GFF4827 at 68.071 kb on + strand, within GFF4827 at 68.072 kb on - strand, within GFF4827 at 68.072 kb on - strand, within GFF4827 at 68.356 kb on + strand, within GFF4827 at 68.359 kb on + strand, within GFF4827 at 68.360 kb on - strand, within GFF4827 at 68.360 kb on - strand, within GFF4827 at 68.650 kb on + strand, within GFF4827 at 68.696 kb on - strand, within GFF4827 at 68.803 kb on + strand at 68.803 kb on + strand at 68.803 kb on + strand at 68.803 kb on + strand at 68.804 kb on - strand at 68.804 kb on - strand at 68.804 kb on - strand at 68.964 kb on + strand, within GFF4828 at 68.965 kb on - strand, within GFF4828 at 68.965 kb on - strand, within GFF4828 at 68.965 kb on - strand, within GFF4828 at 69.105 kb on + strand, within GFF4828 at 69.105 kb on + strand, within GFF4828 at 69.105 kb on + strand, within GFF4828 at 69.105 kb on + strand, within GFF4828 at 69.106 kb on - strand, within GFF4828 at 69.106 kb on - strand, within GFF4828 at 69.106 kb on - strand, within GFF4828 at 69.368 kb on + strand, within GFF4829 at 69.368 kb on + strand, within GFF4829 at 69.369 kb on - strand, within GFF4829 at 69.369 kb on - strand, within GFF4829 at 69.412 kb on + strand, within GFF4829 at 69.413 kb on - strand, within GFF4829 at 69.413 kb on - strand, within GFF4829 at 69.413 kb on - strand, within GFF4829 at 69.413 kb on - strand, within GFF4829 at 69.501 kb on + strand, within GFF4829 at 69.501 kb on + strand, within GFF4829 at 69.501 kb on + strand, within GFF4829 at 69.501 kb on + strand, within GFF4829 at 69.501 kb on + strand, within GFF4829 at 69.502 kb on - strand, within GFF4829 at 69.524 kb on + strand, within GFF4829 at 69.525 kb on - strand, within GFF4829 at 69.620 kb on + strand, within GFF4829 at 69.620 kb on + strand, within GFF4829
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 66,962 + GFF4826 0.36 +0.2 66,963 - GFF4826 0.36 +0.2 66,963 - GFF4826 0.36 -0.1 67,023 - GFF4826 0.40 -1.0 67,061 + GFF4826 0.43 -0.2 67,062 - GFF4826 0.43 -0.8 67,062 - GFF4826 0.43 -0.1 67,062 - GFF4826 0.43 -0.2 67,109 + GFF4826 0.46 +0.6 67,110 - GFF4826 0.46 -0.3 67,110 - GFF4826 0.46 +0.0 67,110 - GFF4826 0.46 +0.3 67,149 - GFF4826 0.49 -0.4 67,160 + GFF4826 0.50 -0.2 67,160 + GFF4826 0.50 -0.3 67,160 + GFF4826 0.50 -0.4 67,161 - GFF4826 0.50 +0.9 67,190 + GFF4826 0.52 +0.3 67,190 + GFF4826 0.52 -0.0 67,191 - GFF4826 0.52 -0.3 67,191 - GFF4826 0.52 -0.6 67,191 - GFF4826 0.52 -0.7 67,287 - GFF4826 0.59 -0.2 67,761 - -0.1 67,770 - +0.3 67,885 + +0.2 68,071 + GFF4827 0.21 +0.2 68,071 + GFF4827 0.21 -0.2 68,071 + GFF4827 0.21 -0.8 68,072 - GFF4827 0.21 -0.7 68,072 - GFF4827 0.21 -1.1 68,356 + GFF4827 0.52 +0.5 68,359 + GFF4827 0.52 +0.8 68,360 - GFF4827 0.52 -0.3 68,360 - GFF4827 0.52 +0.3 68,650 + GFF4827 0.84 -0.4 68,696 - GFF4827 0.89 +0.1 68,803 + +0.1 68,803 + -0.7 68,803 + -0.4 68,803 + -0.3 68,804 - -0.2 68,804 - +1.0 68,804 - -0.3 68,964 + GFF4828 0.46 -0.1 68,965 - GFF4828 0.46 -0.5 68,965 - GFF4828 0.46 +0.0 68,965 - GFF4828 0.46 +0.7 69,105 + GFF4828 0.84 -0.3 69,105 + GFF4828 0.84 -0.3 69,105 + GFF4828 0.84 -0.3 69,105 + GFF4828 0.84 +0.3 69,106 - GFF4828 0.85 -0.4 69,106 - GFF4828 0.85 +0.3 69,106 - GFF4828 0.85 +0.3 69,368 + GFF4829 0.21 -0.8 69,368 + GFF4829 0.21 +1.6 69,369 - GFF4829 0.21 -0.3 69,369 - GFF4829 0.21 -1.5 69,412 + GFF4829 0.26 +0.6 69,413 - GFF4829 0.26 +0.7 69,413 - GFF4829 0.26 -0.4 69,413 - GFF4829 0.26 +0.7 69,413 - GFF4829 0.26 -0.4 69,501 + GFF4829 0.36 -0.3 69,501 + GFF4829 0.36 +0.4 69,501 + GFF4829 0.36 -0.4 69,501 + GFF4829 0.36 -0.8 69,501 + GFF4829 0.36 -0.0 69,502 - GFF4829 0.36 -0.8 69,524 + GFF4829 0.38 +0.2 69,525 - GFF4829 0.38 +0.4 69,620 + GFF4829 0.49 +0.3 69,620 + GFF4829 0.49 +0.5
Or see this region's nucleotide sequence