Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4772 and GFF4773 are separated by 10 nucleotides GFF4773 and GFF4774 are separated by 591 nucleotides
GFF4772 - Crotonobetainyl-CoA reductase, at 11,155 to 12,240
GFF4772
GFF4773 - Putative acyl-CoA dehydrogenase FadE17, at 12,251 to 13,417
GFF4773
GFF4774 - Acyl-CoA dehydrogenase, at 14,009 to 14,509
GFF4774
Position (kb) 12
13
14 Strain fitness (log2 ratio) -2
-1
0
1
2 at 11.490 kb on - strand, within GFF4772 at 11.490 kb on - strand, within GFF4772 at 11.490 kb on - strand, within GFF4772 at 11.490 kb on - strand, within GFF4772 at 11.490 kb on - strand, within GFF4772 at 11.527 kb on + strand, within GFF4772 at 11.528 kb on - strand, within GFF4772 at 11.574 kb on + strand, within GFF4772 at 11.797 kb on + strand, within GFF4772 at 11.797 kb on + strand, within GFF4772 at 11.798 kb on - strand, within GFF4772 at 11.801 kb on + strand, within GFF4772 at 11.801 kb on + strand, within GFF4772 at 11.801 kb on + strand, within GFF4772 at 11.802 kb on - strand, within GFF4772 at 11.802 kb on - strand, within GFF4772 at 11.842 kb on + strand, within GFF4772 at 11.842 kb on + strand, within GFF4772 at 11.842 kb on + strand, within GFF4772 at 11.842 kb on + strand, within GFF4772 at 11.842 kb on + strand, within GFF4772 at 11.843 kb on - strand, within GFF4772 at 11.843 kb on - strand, within GFF4772 at 11.843 kb on - strand, within GFF4772 at 11.880 kb on + strand, within GFF4772 at 11.881 kb on - strand, within GFF4772 at 11.917 kb on + strand, within GFF4772 at 12.115 kb on + strand, within GFF4772 at 12.115 kb on + strand, within GFF4772 at 12.115 kb on + strand, within GFF4772 at 12.116 kb on - strand, within GFF4772 at 12.283 kb on - strand at 12.341 kb on + strand at 12.341 kb on + strand at 12.341 kb on + strand at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.401 kb on + strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.402 kb on - strand, within GFF4773 at 12.491 kb on + strand, within GFF4773 at 12.491 kb on + strand, within GFF4773 at 12.491 kb on + strand, within GFF4773 at 12.492 kb on - strand, within GFF4773 at 12.492 kb on - strand, within GFF4773 at 12.492 kb on - strand, within GFF4773 at 12.644 kb on + strand, within GFF4773 at 12.644 kb on + strand, within GFF4773 at 12.644 kb on + strand, within GFF4773 at 12.645 kb on - strand, within GFF4773 at 12.645 kb on - strand, within GFF4773 at 12.890 kb on + strand, within GFF4773 at 12.952 kb on + strand, within GFF4773 at 12.952 kb on + strand, within GFF4773 at 12.953 kb on - strand, within GFF4773 at 12.953 kb on - strand, within GFF4773 at 13.100 kb on + strand, within GFF4773 at 13.116 kb on + strand, within GFF4773 at 13.117 kb on - strand, within GFF4773 at 13.132 kb on + strand, within GFF4773 at 13.132 kb on + strand, within GFF4773 at 13.132 kb on + strand, within GFF4773 at 13.132 kb on + strand, within GFF4773 at 13.132 kb on + strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.133 kb on - strand, within GFF4773 at 13.142 kb on + strand, within GFF4773 at 13.142 kb on + strand, within GFF4773 at 13.142 kb on + strand, within GFF4773 at 13.143 kb on - strand, within GFF4773 at 13.183 kb on - strand, within GFF4773 at 13.227 kb on - strand, within GFF4773 at 13.352 kb on + strand at 13.637 kb on + strand at 13.638 kb on - strand at 13.664 kb on + strand at 13.664 kb on + strand at 13.665 kb on - strand at 13.685 kb on - strand at 13.685 kb on - strand at 13.748 kb on + strand at 13.749 kb on - strand at 13.758 kb on + strand at 13.758 kb on + strand at 13.758 kb on + strand at 13.758 kb on + strand at 13.758 kb on + strand at 13.809 kb on + strand at 13.809 kb on + strand at 13.810 kb on - strand at 13.810 kb on - strand at 13.926 kb on + strand at 13.926 kb on + strand at 13.926 kb on + strand at 13.926 kb on + strand at 13.927 kb on - strand at 13.927 kb on - strand at 13.927 kb on - strand at 13.927 kb on - strand at 13.927 kb on - strand at 13.927 kb on - strand at 14.054 kb on + strand at 14.055 kb on - strand at 14.144 kb on + strand, within GFF4774 at 14.145 kb on - strand, within GFF4774 at 14.145 kb on - strand, within GFF4774 at 14.219 kb on + strand, within GFF4774 at 14.219 kb on + strand, within GFF4774 at 14.220 kb on - strand, within GFF4774 at 14.270 kb on + strand, within GFF4774 at 14.271 kb on - strand, within GFF4774 at 14.393 kb on + strand, within GFF4774 at 14.394 kb on - strand, within GFF4774
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 11,490 - GFF4772 0.31 -0.5 11,490 - GFF4772 0.31 -0.5 11,490 - GFF4772 0.31 +0.3 11,490 - GFF4772 0.31 +0.6 11,490 - GFF4772 0.31 +0.2 11,527 + GFF4772 0.34 +0.1 11,528 - GFF4772 0.34 +0.4 11,574 + GFF4772 0.39 +0.4 11,797 + GFF4772 0.59 -0.0 11,797 + GFF4772 0.59 -0.2 11,798 - GFF4772 0.59 +1.3 11,801 + GFF4772 0.59 -0.8 11,801 + GFF4772 0.59 -0.3 11,801 + GFF4772 0.59 -0.0 11,802 - GFF4772 0.60 -0.1 11,802 - GFF4772 0.60 -0.5 11,842 + GFF4772 0.63 +0.9 11,842 + GFF4772 0.63 +0.5 11,842 + GFF4772 0.63 -0.2 11,842 + GFF4772 0.63 -0.2 11,842 + GFF4772 0.63 -1.5 11,843 - GFF4772 0.63 +0.3 11,843 - GFF4772 0.63 -0.0 11,843 - GFF4772 0.63 -0.4 11,880 + GFF4772 0.67 -0.0 11,881 - GFF4772 0.67 +0.2 11,917 + GFF4772 0.70 +0.3 12,115 + GFF4772 0.88 -0.6 12,115 + GFF4772 0.88 +0.3 12,115 + GFF4772 0.88 +0.4 12,116 - GFF4772 0.88 -0.8 12,283 - -0.3 12,341 + +0.1 12,341 + -0.0 12,341 + +1.0 12,401 + GFF4773 0.13 +0.3 12,401 + GFF4773 0.13 -0.4 12,401 + GFF4773 0.13 +0.0 12,401 + GFF4773 0.13 +0.7 12,401 + GFF4773 0.13 -0.4 12,401 + GFF4773 0.13 -0.6 12,401 + GFF4773 0.13 -0.7 12,401 + GFF4773 0.13 -0.8 12,402 - GFF4773 0.13 +0.0 12,402 - GFF4773 0.13 +0.6 12,402 - GFF4773 0.13 +0.8 12,402 - GFF4773 0.13 +0.6 12,402 - GFF4773 0.13 +0.3 12,402 - GFF4773 0.13 -0.4 12,402 - GFF4773 0.13 -0.6 12,491 + GFF4773 0.21 -0.6 12,491 + GFF4773 0.21 -0.9 12,491 + GFF4773 0.21 +0.4 12,492 - GFF4773 0.21 -0.1 12,492 - GFF4773 0.21 -0.2 12,492 - GFF4773 0.21 -0.1 12,644 + GFF4773 0.34 -0.9 12,644 + GFF4773 0.34 +0.0 12,644 + GFF4773 0.34 +0.3 12,645 - GFF4773 0.34 -0.1 12,645 - GFF4773 0.34 -0.5 12,890 + GFF4773 0.55 +0.4 12,952 + GFF4773 0.60 +0.6 12,952 + GFF4773 0.60 +0.3 12,953 - GFF4773 0.60 -0.4 12,953 - GFF4773 0.60 +0.2 13,100 + GFF4773 0.73 +0.1 13,116 + GFF4773 0.74 -0.3 13,117 - GFF4773 0.74 +1.1 13,132 + GFF4773 0.75 +1.5 13,132 + GFF4773 0.75 +0.1 13,132 + GFF4773 0.75 -0.6 13,132 + GFF4773 0.75 +0.4 13,132 + GFF4773 0.75 -0.0 13,133 - GFF4773 0.76 +0.0 13,133 - GFF4773 0.76 +0.2 13,133 - GFF4773 0.76 -0.1 13,133 - GFF4773 0.76 +0.1 13,133 - GFF4773 0.76 -0.3 13,133 - GFF4773 0.76 -0.1 13,133 - GFF4773 0.76 -0.1 13,142 + GFF4773 0.76 -0.9 13,142 + GFF4773 0.76 -0.6 13,142 + GFF4773 0.76 +0.5 13,143 - GFF4773 0.76 -0.1 13,183 - GFF4773 0.80 -0.1 13,227 - GFF4773 0.84 -0.3 13,352 + -0.1 13,637 + +2.0 13,638 - -0.6 13,664 + +0.7 13,664 + +0.2 13,665 - -0.6 13,685 - +0.6 13,685 - +0.2 13,748 + -0.2 13,749 - -1.0 13,758 + +0.2 13,758 + -0.4 13,758 + +0.2 13,758 + +0.2 13,758 + +0.4 13,809 + -0.5 13,809 + -0.1 13,810 - -0.2 13,810 - -0.8 13,926 + +1.1 13,926 + -0.3 13,926 + -0.4 13,926 + +0.4 13,927 - -0.4 13,927 - +0.3 13,927 - -1.0 13,927 - +0.2 13,927 - -0.1 13,927 - +0.7 14,054 + +0.2 14,055 - -2.4 14,144 + GFF4774 0.27 -0.1 14,145 - GFF4774 0.27 -1.4 14,145 - GFF4774 0.27 -0.4 14,219 + GFF4774 0.42 -0.8 14,219 + GFF4774 0.42 -0.2 14,220 - GFF4774 0.42 -0.4 14,270 + GFF4774 0.52 +0.7 14,271 - GFF4774 0.52 -0.8 14,393 + GFF4774 0.77 -0.7 14,394 - GFF4774 0.77 +0.4
Or see this region's nucleotide sequence