Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4464 and GFF4465 are separated by 21 nucleotides GFF4465 and GFF4466 are separated by 239 nucleotides GFF4466 and GFF4467 are separated by 139 nucleotides
GFF4464 - 50S ribosomal protein L27, at 42,988 to 43,260
GFF4464
GFF4465 - 50S ribosomal protein L21, at 43,282 to 43,629
GFF4465
GFF4466 - hypothetical protein, at 43,869 to 45,119
GFF4466
GFF4467 - RNA polymerase sigma-54 factor 2, at 45,259 to 46,824
GFF4467
Position (kb) 43
44
45
46 Strain fitness (log2 ratio) -1
0
1
2 at 44.479 kb on + strand, within GFF4466 at 44.726 kb on - strand, within GFF4466 at 44.726 kb on - strand, within GFF4466 at 44.969 kb on - strand, within GFF4466 at 44.983 kb on + strand, within GFF4466 at 45.037 kb on + strand at 45.037 kb on + strand at 45.038 kb on - strand at 45.335 kb on + strand at 45.335 kb on + strand at 45.554 kb on + strand, within GFF4467 at 45.554 kb on + strand, within GFF4467 at 45.554 kb on + strand, within GFF4467 at 45.554 kb on + strand, within GFF4467 at 45.554 kb on + strand, within GFF4467 at 45.555 kb on - strand, within GFF4467 at 45.555 kb on - strand, within GFF4467 at 45.555 kb on - strand, within GFF4467 at 45.815 kb on + strand, within GFF4467 at 45.815 kb on + strand, within GFF4467 at 45.816 kb on - strand, within GFF4467 at 45.896 kb on + strand, within GFF4467 at 45.896 kb on + strand, within GFF4467 at 45.897 kb on - strand, within GFF4467 at 45.897 kb on - strand, within GFF4467
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 44,479 + GFF4466 0.49 -0.5 44,726 - GFF4466 0.69 -0.5 44,726 - GFF4466 0.69 -1.2 44,969 - GFF4466 0.88 -0.4 44,983 + GFF4466 0.89 -0.2 45,037 + -0.2 45,037 + -0.5 45,038 - -0.6 45,335 + +1.5 45,335 + +1.9 45,554 + GFF4467 0.19 +1.5 45,554 + GFF4467 0.19 +2.0 45,554 + GFF4467 0.19 +2.0 45,554 + GFF4467 0.19 +1.6 45,554 + GFF4467 0.19 +1.7 45,555 - GFF4467 0.19 +2.2 45,555 - GFF4467 0.19 +1.5 45,555 - GFF4467 0.19 +1.6 45,815 + GFF4467 0.36 +1.3 45,815 + GFF4467 0.36 +1.8 45,816 - GFF4467 0.36 +1.4 45,896 + GFF4467 0.41 +2.3 45,896 + GFF4467 0.41 +1.8 45,897 - GFF4467 0.41 +2.7 45,897 - GFF4467 0.41 +2.5
Or see this region's nucleotide sequence