Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4366 and GFF4367 are separated by 45 nucleotides GFF4367 and GFF4368 are separated by 2 nucleotides GFF4368 and GFF4369 are separated by 334 nucleotides
GFF4366 - hypothetical protein, at 153,903 to 154,889
GFF4366
GFF4367 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 154,935 to 156,251
GFF4367
GFF4368 - hypothetical protein, at 156,254 to 156,802
GFF4368
GFF4369 - hypothetical protein, at 157,137 to 160,850
GFF4369
Position (kb) 154
155
156
157 Strain fitness (log2 ratio) -1
0
1
2 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.057 kb on + strand, within GFF4366 at 154.058 kb on - strand, within GFF4366 at 154.210 kb on + strand, within GFF4366 at 154.211 kb on - strand, within GFF4366 at 154.211 kb on - strand, within GFF4366 at 154.216 kb on + strand, within GFF4366 at 154.375 kb on + strand, within GFF4366 at 154.375 kb on + strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.376 kb on - strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.462 kb on + strand, within GFF4366 at 154.463 kb on - strand, within GFF4366 at 154.463 kb on - strand, within GFF4366 at 154.543 kb on + strand, within GFF4366 at 155.057 kb on + strand at 155.143 kb on + strand, within GFF4367 at 155.144 kb on - strand, within GFF4367 at 155.251 kb on - strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.254 kb on + strand, within GFF4367 at 155.255 kb on - strand, within GFF4367 at 155.255 kb on - strand, within GFF4367 at 155.665 kb on + strand, within GFF4367 at 155.675 kb on - strand, within GFF4367 at 155.675 kb on - strand, within GFF4367 at 155.752 kb on + strand, within GFF4367 at 155.752 kb on + strand, within GFF4367 at 155.753 kb on - strand, within GFF4367 at 155.919 kb on + strand, within GFF4367 at 156.321 kb on + strand, within GFF4368 at 156.321 kb on + strand, within GFF4368 at 156.400 kb on - strand, within GFF4368 at 156.606 kb on + strand, within GFF4368 at 156.774 kb on + strand at 156.774 kb on + strand at 156.775 kb on - strand at 156.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 154,057 + GFF4366 0.16 +0.0 154,057 + GFF4366 0.16 +0.9 154,057 + GFF4366 0.16 -0.6 154,057 + GFF4366 0.16 +0.2 154,058 - GFF4366 0.16 -0.2 154,210 + GFF4366 0.31 -0.3 154,211 - GFF4366 0.31 -0.3 154,211 - GFF4366 0.31 +0.5 154,216 + GFF4366 0.32 -0.2 154,375 + GFF4366 0.48 +0.1 154,375 + GFF4366 0.48 +1.9 154,376 - GFF4366 0.48 -1.1 154,376 - GFF4366 0.48 +0.4 154,376 - GFF4366 0.48 -0.8 154,462 + GFF4366 0.57 -0.7 154,462 + GFF4366 0.57 -0.6 154,462 + GFF4366 0.57 -1.0 154,463 - GFF4366 0.57 +0.4 154,463 - GFF4366 0.57 +0.3 154,543 + GFF4366 0.65 +0.6 155,057 + -0.9 155,143 + GFF4367 0.16 -0.2 155,144 - GFF4367 0.16 -0.5 155,251 - GFF4367 0.24 -0.5 155,254 + GFF4367 0.24 -0.4 155,254 + GFF4367 0.24 -0.0 155,254 + GFF4367 0.24 +0.2 155,254 + GFF4367 0.24 -0.0 155,254 + GFF4367 0.24 +0.7 155,255 - GFF4367 0.24 -0.1 155,255 - GFF4367 0.24 -0.8 155,665 + GFF4367 0.55 +0.2 155,675 - GFF4367 0.56 -0.2 155,675 - GFF4367 0.56 -0.4 155,752 + GFF4367 0.62 +0.2 155,752 + GFF4367 0.62 -1.5 155,753 - GFF4367 0.62 -1.1 155,919 + GFF4367 0.75 +0.6 156,321 + GFF4368 0.12 -0.8 156,321 + GFF4368 0.12 -0.6 156,400 - GFF4368 0.27 +0.7 156,606 + GFF4368 0.64 +0.1 156,774 + +0.5 156,774 + -0.6 156,775 - +0.5 156,775 - -0.1
Or see this region's nucleotide sequence