Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4360 and GFF4361 are separated by 588 nucleotides GFF4361 and GFF4362 overlap by 1 nucleotides
GFF4360 - hypothetical protein, at 146,088 to 146,702
GFF4360
GFF4361 - Sulfate adenylyltransferase subunit 2, at 147,291 to 148,190
GFF4361
GFF4362 - Bifunctional enzyme CysN/CysC, at 148,190 to 150,100
GFF4362
Position (kb) 147
148
149 Strain fitness (log2 ratio) -1
0
1 at 146.613 kb on + strand, within GFF4360 at 147.204 kb on - strand at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.498 kb on + strand, within GFF4361 at 147.499 kb on - strand, within GFF4361 at 147.789 kb on + strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.790 kb on - strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.867 kb on + strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.868 kb on - strand, within GFF4361 at 147.903 kb on + strand, within GFF4361 at 147.904 kb on - strand, within GFF4361 at 148.032 kb on + strand, within GFF4361 at 148.033 kb on - strand, within GFF4361 at 148.182 kb on + strand at 148.183 kb on - strand at 148.214 kb on + strand at 148.214 kb on + strand at 148.215 kb on - strand at 148.215 kb on - strand at 148.253 kb on + strand at 148.254 kb on - strand at 148.254 kb on - strand at 148.496 kb on + strand, within GFF4362 at 148.497 kb on - strand, within GFF4362 at 148.497 kb on - strand, within GFF4362 at 148.559 kb on + strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.560 kb on - strand, within GFF4362 at 148.658 kb on + strand, within GFF4362 at 148.659 kb on - strand, within GFF4362
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 146,613 + GFF4360 0.85 -0.2 147,204 - -0.6 147,498 + GFF4361 0.23 +0.5 147,498 + GFF4361 0.23 +0.7 147,498 + GFF4361 0.23 +0.6 147,498 + GFF4361 0.23 +0.1 147,498 + GFF4361 0.23 -0.5 147,499 - GFF4361 0.23 +0.0 147,789 + GFF4361 0.55 +0.4 147,790 - GFF4361 0.55 +1.1 147,790 - GFF4361 0.55 +1.1 147,790 - GFF4361 0.55 +0.4 147,867 + GFF4361 0.64 +0.1 147,867 + GFF4361 0.64 -0.1 147,867 + GFF4361 0.64 +0.1 147,867 + GFF4361 0.64 +1.0 147,867 + GFF4361 0.64 -0.1 147,867 + GFF4361 0.64 +0.4 147,868 - GFF4361 0.64 -0.9 147,868 - GFF4361 0.64 +0.1 147,868 - GFF4361 0.64 +0.7 147,868 - GFF4361 0.64 -0.3 147,903 + GFF4361 0.68 +0.6 147,904 - GFF4361 0.68 +0.2 148,032 + GFF4361 0.82 +0.3 148,033 - GFF4361 0.82 +0.3 148,182 + -0.9 148,183 - -0.5 148,214 + +0.1 148,214 + -0.2 148,215 - +0.9 148,215 - +1.4 148,253 + +1.0 148,254 - +0.2 148,254 - +0.1 148,496 + GFF4362 0.16 -0.0 148,497 - GFF4362 0.16 -0.3 148,497 - GFF4362 0.16 +1.0 148,559 + GFF4362 0.19 +0.4 148,560 - GFF4362 0.19 -1.1 148,560 - GFF4362 0.19 +0.0 148,560 - GFF4362 0.19 +0.1 148,560 - GFF4362 0.19 -0.0 148,658 + GFF4362 0.24 -1.1 148,659 - GFF4362 0.25 +0.3
Or see this region's nucleotide sequence