Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4357 and GFF4358 are separated by 270 nucleotides GFF4358 and GFF4359 are separated by 203 nucleotides
GFF4357 - hypothetical protein, at 142,051 to 142,965
GFF4357
GFF4358 - Protein flp, at 143,236 to 144,441
GFF4358
GFF4359 - hypothetical protein, at 144,645 to 145,922
GFF4359
Position (kb) 143
144
145 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 142.375 kb on + strand, within GFF4357 at 142.376 kb on - strand, within GFF4357 at 142.376 kb on - strand, within GFF4357 at 142.497 kb on - strand, within GFF4357 at 142.497 kb on - strand, within GFF4357 at 142.547 kb on + strand, within GFF4357 at 142.550 kb on - strand, within GFF4357 at 143.353 kb on + strand at 143.354 kb on - strand at 143.354 kb on - strand at 143.354 kb on - strand at 143.354 kb on - strand at 143.354 kb on - strand at 143.354 kb on - strand at 143.377 kb on + strand, within GFF4358 at 143.377 kb on + strand, within GFF4358 at 143.377 kb on + strand, within GFF4358 at 143.378 kb on - strand, within GFF4358 at 143.701 kb on + strand, within GFF4358 at 143.900 kb on - strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 144.066 kb on + strand, within GFF4358 at 144.066 kb on + strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.229 kb on + strand, within GFF4358 at 144.229 kb on + strand, within GFF4358 at 144.230 kb on - strand, within GFF4358 at 144.368 kb on - strand at 144.368 kb on - strand at 144.418 kb on + strand at 144.585 kb on + strand at 144.585 kb on + strand at 144.585 kb on + strand at 144.586 kb on - strand at 144.586 kb on - strand at 144.702 kb on + strand at 144.702 kb on + strand at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.150 kb on - strand, within GFF4359 at 145.171 kb on - strand, within GFF4359 at 145.392 kb on + strand, within GFF4359
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 142,375 + GFF4357 0.35 -0.0 142,376 - GFF4357 0.36 +0.4 142,376 - GFF4357 0.36 -1.8 142,497 - GFF4357 0.49 -0.2 142,497 - GFF4357 0.49 +1.2 142,547 + GFF4357 0.54 -1.0 142,550 - GFF4357 0.55 -0.2 143,353 + -1.2 143,354 - +0.9 143,354 - -0.0 143,354 - +0.1 143,354 - +0.4 143,354 - +0.8 143,354 - -0.4 143,377 + GFF4358 0.12 -0.2 143,377 + GFF4358 0.12 +1.3 143,377 + GFF4358 0.12 +0.5 143,378 - GFF4358 0.12 -0.4 143,701 + GFF4358 0.39 -0.5 143,900 - GFF4358 0.55 +0.1 143,956 + GFF4358 0.60 +0.9 143,956 + GFF4358 0.60 +0.1 143,956 + GFF4358 0.60 -0.6 143,956 + GFF4358 0.60 +0.9 143,956 + GFF4358 0.60 -2.8 143,956 + GFF4358 0.60 -0.4 143,957 - GFF4358 0.60 -0.2 143,957 - GFF4358 0.60 -0.4 143,957 - GFF4358 0.60 -0.1 143,957 - GFF4358 0.60 +0.2 143,957 - GFF4358 0.60 -0.4 143,957 - GFF4358 0.60 +0.7 144,066 + GFF4358 0.69 -0.5 144,066 + GFF4358 0.69 +0.5 144,067 - GFF4358 0.69 -0.4 144,067 - GFF4358 0.69 +1.4 144,067 - GFF4358 0.69 -0.8 144,067 - GFF4358 0.69 +0.0 144,229 + GFF4358 0.82 +0.5 144,229 + GFF4358 0.82 +0.3 144,230 - GFF4358 0.82 -0.8 144,368 - +0.8 144,368 - -0.4 144,418 + -0.2 144,585 + +0.8 144,585 + -0.6 144,585 + -0.5 144,586 - -0.1 144,586 - -0.5 144,702 + +0.2 144,702 + -0.6 145,149 + GFF4359 0.39 -0.2 145,149 + GFF4359 0.39 +0.4 145,149 + GFF4359 0.39 +0.2 145,149 + GFF4359 0.39 +0.1 145,149 + GFF4359 0.39 +0.4 145,150 - GFF4359 0.40 +0.8 145,171 - GFF4359 0.41 -1.0 145,392 + GFF4359 0.58 -0.6
Or see this region's nucleotide sequence