Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4352 and GFF4353 are separated by 124 nucleotides GFF4353 and GFF4354 are separated by 3 nucleotides
GFF4352 - Multidrug resistance protein MdtC, at 134,105 to 137,194
GFF4352
GFF4353 - hypothetical protein, at 137,319 to 138,344
GFF4353
GFF4354 - hypothetical protein, at 138,348 to 139,811
GFF4354
Position (kb) 137
138
139 Strain fitness (log2 ratio) -1
0
1 at 136.352 kb on + strand, within GFF4352 at 136.353 kb on - strand, within GFF4352 at 136.353 kb on - strand, within GFF4352 at 136.353 kb on - strand, within GFF4352 at 136.353 kb on - strand, within GFF4352 at 136.479 kb on - strand, within GFF4352 at 136.629 kb on - strand, within GFF4352 at 137.123 kb on + strand at 137.123 kb on + strand at 137.124 kb on - strand at 137.124 kb on - strand at 137.124 kb on - strand at 137.335 kb on + strand at 137.532 kb on + strand, within GFF4353 at 137.676 kb on + strand, within GFF4353 at 137.676 kb on + strand, within GFF4353 at 137.676 kb on + strand, within GFF4353 at 137.677 kb on - strand, within GFF4353 at 137.910 kb on + strand, within GFF4353 at 137.911 kb on - strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.078 kb on + strand, within GFF4353 at 138.079 kb on - strand, within GFF4353 at 138.079 kb on - strand, within GFF4353 at 138.079 kb on - strand, within GFF4353 at 138.079 kb on - strand, within GFF4353 at 138.079 kb on - strand, within GFF4353 at 138.606 kb on + strand, within GFF4354 at 138.606 kb on + strand, within GFF4354 at 138.607 kb on - strand, within GFF4354 at 138.607 kb on - strand, within GFF4354 at 138.607 kb on - strand, within GFF4354 at 138.615 kb on + strand, within GFF4354 at 138.675 kb on + strand, within GFF4354 at 138.676 kb on - strand, within GFF4354
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 136,352 + GFF4352 0.73 -0.1 136,353 - GFF4352 0.73 +0.5 136,353 - GFF4352 0.73 +0.2 136,353 - GFF4352 0.73 +0.6 136,353 - GFF4352 0.73 +0.3 136,479 - GFF4352 0.77 -0.5 136,629 - GFF4352 0.82 -0.6 137,123 + +0.6 137,123 + -0.7 137,124 - +0.2 137,124 - -0.1 137,124 - -0.0 137,335 + -0.2 137,532 + GFF4353 0.21 -0.2 137,676 + GFF4353 0.35 -0.4 137,676 + GFF4353 0.35 -0.3 137,676 + GFF4353 0.35 +0.8 137,677 - GFF4353 0.35 -0.4 137,910 + GFF4353 0.58 -0.2 137,911 - GFF4353 0.58 -0.5 138,078 + GFF4353 0.74 -0.2 138,078 + GFF4353 0.74 +0.7 138,078 + GFF4353 0.74 +0.3 138,078 + GFF4353 0.74 -0.5 138,078 + GFF4353 0.74 -0.8 138,078 + GFF4353 0.74 -0.3 138,078 + GFF4353 0.74 -1.2 138,079 - GFF4353 0.74 -0.6 138,079 - GFF4353 0.74 +0.4 138,079 - GFF4353 0.74 -0.2 138,079 - GFF4353 0.74 +0.3 138,079 - GFF4353 0.74 +0.3 138,606 + GFF4354 0.18 +1.5 138,606 + GFF4354 0.18 -0.5 138,607 - GFF4354 0.18 -0.7 138,607 - GFF4354 0.18 +1.1 138,607 - GFF4354 0.18 -1.1 138,615 + GFF4354 0.18 -0.7 138,675 + GFF4354 0.22 -0.6 138,676 - GFF4354 0.22 +0.0
Or see this region's nucleotide sequence