Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4191 and GFF4192 are separated by 20 nucleotides GFF4192 and GFF4193 are separated by 271 nucleotides
GFF4191 - hypothetical protein, at 210,239 to 211,954
GFF4191
GFF4192 - Aminomethyltransferase, at 211,975 to 213,114
GFF4192
GFF4193 - hypothetical protein, at 213,386 to 214,465
GFF4193
Position (kb) 211
212
213
214 Strain fitness (log2 ratio) -1
0
1 at 211.085 kb on + strand, within GFF4191 at 211.565 kb on + strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.566 kb on - strand, within GFF4191 at 211.640 kb on + strand, within GFF4191 at 211.640 kb on + strand, within GFF4191 at 211.641 kb on - strand, within GFF4191 at 211.796 kb on + strand at 211.796 kb on + strand at 211.797 kb on - strand at 211.797 kb on - strand at 211.797 kb on - strand at 211.892 kb on + strand at 211.892 kb on + strand at 211.893 kb on - strand at 211.893 kb on - strand at 212.086 kb on + strand at 212.087 kb on - strand at 212.101 kb on + strand, within GFF4192 at 212.101 kb on + strand, within GFF4192 at 212.101 kb on + strand, within GFF4192 at 212.101 kb on + strand, within GFF4192 at 212.101 kb on + strand, within GFF4192 at 212.101 kb on + strand, within GFF4192 at 212.102 kb on - strand, within GFF4192 at 212.302 kb on + strand, within GFF4192 at 212.494 kb on + strand, within GFF4192 at 212.557 kb on + strand, within GFF4192 at 212.573 kb on - strand, within GFF4192 at 212.713 kb on + strand, within GFF4192 at 212.714 kb on - strand, within GFF4192 at 212.935 kb on + strand, within GFF4192 at 212.935 kb on + strand, within GFF4192 at 212.935 kb on + strand, within GFF4192 at 212.975 kb on + strand, within GFF4192 at 212.975 kb on + strand, within GFF4192 at 212.976 kb on - strand, within GFF4192 at 212.976 kb on - strand, within GFF4192 at 212.976 kb on - strand, within GFF4192 at 212.976 kb on - strand, within GFF4192 at 213.064 kb on + strand at 213.064 kb on + strand at 213.064 kb on + strand at 213.106 kb on - strand at 213.106 kb on - strand at 213.266 kb on - strand at 213.334 kb on - strand at 213.641 kb on + strand, within GFF4193 at 213.641 kb on + strand, within GFF4193 at 213.642 kb on - strand, within GFF4193 at 213.653 kb on + strand, within GFF4193 at 213.654 kb on - strand, within GFF4193 at 213.751 kb on + strand, within GFF4193 at 213.752 kb on - strand, within GFF4193 at 213.752 kb on - strand, within GFF4193 at 213.755 kb on + strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 213.756 kb on - strand, within GFF4193 at 214.029 kb on + strand, within GFF4193 at 214.029 kb on + strand, within GFF4193 at 214.030 kb on - strand, within GFF4193
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 211,085 + GFF4191 0.49 +0.7 211,565 + GFF4191 0.77 -0.2 211,566 - GFF4191 0.77 +0.2 211,566 - GFF4191 0.77 +0.2 211,566 - GFF4191 0.77 -0.6 211,566 - GFF4191 0.77 -0.1 211,566 - GFF4191 0.77 +0.3 211,566 - GFF4191 0.77 +0.4 211,640 + GFF4191 0.82 -0.2 211,640 + GFF4191 0.82 +0.1 211,641 - GFF4191 0.82 -1.1 211,796 + -0.6 211,796 + +0.2 211,797 - +0.2 211,797 - +1.2 211,797 - +0.3 211,892 + -0.4 211,892 + -0.1 211,893 - +0.5 211,893 - +0.4 212,086 + +0.0 212,087 - -0.5 212,101 + GFF4192 0.11 +0.6 212,101 + GFF4192 0.11 +0.1 212,101 + GFF4192 0.11 -0.1 212,101 + GFF4192 0.11 -0.1 212,101 + GFF4192 0.11 -0.8 212,101 + GFF4192 0.11 -0.2 212,102 - GFF4192 0.11 +0.1 212,302 + GFF4192 0.29 -0.0 212,494 + GFF4192 0.46 -0.8 212,557 + GFF4192 0.51 -0.7 212,573 - GFF4192 0.52 +0.4 212,713 + GFF4192 0.65 +0.7 212,714 - GFF4192 0.65 -0.4 212,935 + GFF4192 0.84 +0.5 212,935 + GFF4192 0.84 +0.5 212,935 + GFF4192 0.84 +0.6 212,975 + GFF4192 0.88 +0.2 212,975 + GFF4192 0.88 +0.6 212,976 - GFF4192 0.88 +0.3 212,976 - GFF4192 0.88 -0.3 212,976 - GFF4192 0.88 -0.1 212,976 - GFF4192 0.88 +0.6 213,064 + -0.2 213,064 + +1.0 213,064 + -0.1 213,106 - +0.0 213,106 - +0.3 213,266 - -0.5 213,334 - -0.7 213,641 + GFF4193 0.24 +0.5 213,641 + GFF4193 0.24 -1.0 213,642 - GFF4193 0.24 -0.3 213,653 + GFF4193 0.25 +0.0 213,654 - GFF4193 0.25 -0.4 213,751 + GFF4193 0.34 -0.4 213,752 - GFF4193 0.34 +0.1 213,752 - GFF4193 0.34 -0.1 213,755 + GFF4193 0.34 +0.2 213,756 - GFF4193 0.34 +0.1 213,756 - GFF4193 0.34 -0.2 213,756 - GFF4193 0.34 -0.7 213,756 - GFF4193 0.34 -0.2 213,756 - GFF4193 0.34 -0.5 213,756 - GFF4193 0.34 +0.1 213,756 - GFF4193 0.34 +0.1 214,029 + GFF4193 0.60 -0.9 214,029 + GFF4193 0.60 +1.3 214,030 - GFF4193 0.60 -0.5
Or see this region's nucleotide sequence