Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4188 and GFF4189 are separated by 8 nucleotides GFF4189 and GFF4190 overlap by 1 nucleotides
GFF4188 - hypothetical protein, at 206,873 to 208,276
GFF4188
GFF4189 - Electron transfer flavoprotein subunit beta, at 208,285 to 209,079
GFF4189
GFF4190 - Electron transfer flavoprotein subunit alpha, at 209,079 to 210,050
GFF4190
Position (kb) 208
209
210 Strain fitness (log2 ratio) -2
-1
0
1 at 208.098 kb on - strand, within GFF4188 at 208.292 kb on + strand at 208.292 kb on + strand at 208.292 kb on + strand at 208.293 kb on - strand at 208.293 kb on - strand at 208.293 kb on - strand at 208.405 kb on + strand, within GFF4189 at 208.405 kb on + strand, within GFF4189 at 208.406 kb on - strand, within GFF4189 at 208.406 kb on - strand, within GFF4189 at 208.858 kb on + strand, within GFF4189 at 209.292 kb on + strand, within GFF4190 at 209.293 kb on - strand, within GFF4190 at 209.307 kb on + strand, within GFF4190 at 209.307 kb on + strand, within GFF4190 at 209.307 kb on + strand, within GFF4190 at 209.308 kb on - strand, within GFF4190 at 209.308 kb on - strand, within GFF4190 at 209.378 kb on + strand, within GFF4190 at 209.379 kb on - strand, within GFF4190 at 209.379 kb on - strand, within GFF4190 at 209.379 kb on - strand, within GFF4190 at 209.488 kb on - strand, within GFF4190 at 209.871 kb on + strand, within GFF4190 at 209.871 kb on + strand, within GFF4190 at 209.872 kb on - strand, within GFF4190 at 210.049 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 208,098 - GFF4188 0.87 -0.5 208,292 + -0.0 208,292 + +0.8 208,292 + +1.2 208,293 - -0.0 208,293 - -2.4 208,293 - +0.4 208,405 + GFF4189 0.15 -0.6 208,405 + GFF4189 0.15 -0.4 208,406 - GFF4189 0.15 +0.4 208,406 - GFF4189 0.15 -0.9 208,858 + GFF4189 0.72 -0.8 209,292 + GFF4190 0.22 +0.6 209,293 - GFF4190 0.22 -0.5 209,307 + GFF4190 0.23 -0.8 209,307 + GFF4190 0.23 +1.1 209,307 + GFF4190 0.23 +0.2 209,308 - GFF4190 0.24 -0.7 209,308 - GFF4190 0.24 -0.2 209,378 + GFF4190 0.31 +0.0 209,379 - GFF4190 0.31 -0.6 209,379 - GFF4190 0.31 -0.3 209,379 - GFF4190 0.31 +0.8 209,488 - GFF4190 0.42 +0.0 209,871 + GFF4190 0.81 +1.0 209,871 + GFF4190 0.81 +0.5 209,872 - GFF4190 0.82 -0.1 210,049 - +0.4
Or see this region's nucleotide sequence