Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3843 and GFF3844 are separated by 88 nucleotides GFF3844 and GFF3845 are separated by 28 nucleotides GFF3845 and GFF3846 are separated by 40 nucleotides
GFF3843 - hypothetical protein, at 206,113 to 208,233
GFF3843
GFF3844 - hypothetical protein, at 208,322 to 209,188
GFF3844
GFF3845 - hypothetical protein, at 209,217 to 209,618
GFF3845
GFF3846 - hypothetical protein, at 209,659 to 210,111
GFF3846
Position (kb) 208
209
210 Strain fitness (log2 ratio) -2
-1
0
1 at 207.385 kb on + strand, within GFF3843 at 207.389 kb on - strand, within GFF3843 at 207.406 kb on + strand, within GFF3843 at 207.407 kb on - strand, within GFF3843 at 207.844 kb on - strand, within GFF3843 at 208.106 kb on - strand at 208.138 kb on + strand at 208.139 kb on - strand at 208.230 kb on - strand at 208.757 kb on + strand, within GFF3844 at 208.757 kb on + strand, within GFF3844 at 208.767 kb on + strand, within GFF3844 at 208.850 kb on + strand, within GFF3844 at 208.949 kb on + strand, within GFF3844 at 208.950 kb on - strand, within GFF3844 at 209.108 kb on + strand at 209.108 kb on + strand at 209.109 kb on - strand at 209.109 kb on - strand at 209.109 kb on - strand at 209.147 kb on + strand at 209.147 kb on + strand at 209.147 kb on + strand at 209.148 kb on - strand at 209.264 kb on - strand, within GFF3845 at 209.297 kb on - strand, within GFF3845 at 209.341 kb on + strand, within GFF3845 at 209.347 kb on + strand, within GFF3845 at 209.471 kb on - strand, within GFF3845 at 209.504 kb on + strand, within GFF3845 at 209.504 kb on + strand, within GFF3845 at 209.505 kb on - strand, within GFF3845 at 209.505 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.507 kb on - strand, within GFF3845 at 209.698 kb on + strand at 209.972 kb on + strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846 at 209.973 kb on - strand, within GFF3846
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 207,385 + GFF3843 0.60 +0.9 207,389 - GFF3843 0.60 -0.8 207,406 + GFF3843 0.61 +0.8 207,407 - GFF3843 0.61 -0.5 207,844 - GFF3843 0.82 +0.3 208,106 - -0.2 208,138 + +0.2 208,139 - -0.2 208,230 - +0.1 208,757 + GFF3844 0.50 -0.3 208,757 + GFF3844 0.50 -1.7 208,767 + GFF3844 0.51 +0.8 208,850 + GFF3844 0.61 -0.6 208,949 + GFF3844 0.72 -0.1 208,950 - GFF3844 0.72 -1.5 209,108 + -0.4 209,108 + -0.1 209,109 - -0.3 209,109 - -0.2 209,109 - +0.1 209,147 + +0.0 209,147 + -0.3 209,147 + +0.4 209,148 - +0.4 209,264 - GFF3845 0.12 -0.4 209,297 - GFF3845 0.20 -0.7 209,341 + GFF3845 0.31 -0.6 209,347 + GFF3845 0.32 +0.0 209,471 - GFF3845 0.63 +0.2 209,504 + GFF3845 0.71 -0.5 209,504 + GFF3845 0.71 +0.1 209,505 - GFF3845 0.72 +0.5 209,505 - GFF3845 0.72 -0.2 209,507 - GFF3845 0.72 -0.1 209,507 - GFF3845 0.72 +1.1 209,507 - GFF3845 0.72 -2.4 209,507 - GFF3845 0.72 -0.3 209,698 + +0.4 209,972 + GFF3846 0.69 +0.5 209,973 - GFF3846 0.69 +0.9 209,973 - GFF3846 0.69 -0.1 209,973 - GFF3846 0.69 -0.4 209,973 - GFF3846 0.69 -0.1
Or see this region's nucleotide sequence