Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF382 and GFF383 are separated by 124 nucleotides GFF383 and GFF384 are separated by 79 nucleotides GFF384 and GFF385 are separated by 124 nucleotides
GFF382 - hypothetical protein, at 394,547 to 395,107
GFF382
GFF383 - Peptidyl-prolyl cis-trans isomerase B, at 395,232 to 395,690
GFF383
GFF384 - Proteasome subunit beta, at 395,770 to 396,540
GFF384
GFF385 - hypothetical protein, at 396,665 to 397,837
GFF385
Position (kb) 395
396
397 Strain fitness (log2 ratio) -1
0
1
2 at 394.812 kb on - strand, within GFF382 at 394.839 kb on - strand, within GFF382 at 394.976 kb on + strand, within GFF382 at 395.350 kb on - strand, within GFF383 at 395.351 kb on + strand, within GFF383 at 395.759 kb on - strand at 395.759 kb on - strand at 395.810 kb on + strand at 395.883 kb on - strand, within GFF384 at 395.906 kb on + strand, within GFF384 at 396.041 kb on + strand, within GFF384 at 396.074 kb on + strand, within GFF384 at 396.075 kb on - strand, within GFF384 at 396.150 kb on - strand, within GFF384 at 396.150 kb on - strand, within GFF384 at 396.533 kb on + strand at 396.533 kb on + strand at 396.533 kb on + strand at 396.533 kb on + strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.534 kb on - strand at 396.569 kb on + strand at 396.569 kb on + strand at 396.570 kb on - strand at 396.571 kb on + strand at 396.571 kb on + strand at 396.572 kb on - strand at 396.572 kb on - strand at 396.572 kb on - strand at 396.760 kb on - strand at 396.760 kb on - strand at 396.798 kb on + strand, within GFF385 at 396.799 kb on - strand, within GFF385 at 396.799 kb on - strand, within GFF385 at 396.810 kb on + strand, within GFF385 at 396.828 kb on + strand, within GFF385 at 396.915 kb on + strand, within GFF385 at 396.972 kb on + strand, within GFF385 at 396.972 kb on + strand, within GFF385 at 397.014 kb on + strand, within GFF385 at 397.014 kb on + strand, within GFF385 at 397.015 kb on - strand, within GFF385 at 397.015 kb on - strand, within GFF385 at 397.098 kb on + strand, within GFF385 at 397.099 kb on - strand, within GFF385 at 397.134 kb on + strand, within GFF385 at 397.135 kb on - strand, within GFF385 at 397.281 kb on + strand, within GFF385 at 397.282 kb on - strand, within GFF385 at 397.471 kb on - strand, within GFF385
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 394,812 - GFF382 0.47 -0.6 394,839 - GFF382 0.52 -0.5 394,976 + GFF382 0.76 +0.0 395,350 - GFF383 0.26 -1.1 395,351 + GFF383 0.26 +0.7 395,759 - +0.3 395,759 - -0.1 395,810 + +0.5 395,883 - GFF384 0.15 -0.5 395,906 + GFF384 0.18 -0.2 396,041 + GFF384 0.35 -0.7 396,074 + GFF384 0.39 -0.6 396,075 - GFF384 0.40 +0.2 396,150 - GFF384 0.49 +0.3 396,150 - GFF384 0.49 -0.3 396,533 + -0.3 396,533 + +0.2 396,533 + +0.6 396,533 + -0.2 396,534 - +0.3 396,534 - -0.7 396,534 - -0.1 396,534 - +0.6 396,534 - -1.1 396,569 + +0.8 396,569 + +0.8 396,570 - +0.9 396,571 + +0.5 396,571 + -0.2 396,572 - +0.1 396,572 - -0.1 396,572 - +0.4 396,760 - -0.4 396,760 - +1.0 396,798 + GFF385 0.11 +1.9 396,799 - GFF385 0.11 -0.1 396,799 - GFF385 0.11 -0.1 396,810 + GFF385 0.12 +0.2 396,828 + GFF385 0.14 +0.4 396,915 + GFF385 0.21 -0.4 396,972 + GFF385 0.26 +0.3 396,972 + GFF385 0.26 +0.4 397,014 + GFF385 0.30 +1.0 397,014 + GFF385 0.30 -0.9 397,015 - GFF385 0.30 +0.1 397,015 - GFF385 0.30 +0.5 397,098 + GFF385 0.37 +0.5 397,099 - GFF385 0.37 -0.2 397,134 + GFF385 0.40 -0.3 397,135 - GFF385 0.40 -0.4 397,281 + GFF385 0.53 -0.4 397,282 - GFF385 0.53 +0.7 397,471 - GFF385 0.69 -0.1
Or see this region's nucleotide sequence