Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3652 and GFF3653 are separated by 15 nucleotides GFF3653 and GFF3654 are separated by 140 nucleotides
GFF3652 - hypothetical protein, at 518,960 to 520,114
GFF3652
GFF3653 - hypothetical protein, at 520,130 to 520,411
GFF3653
GFF3654 - hypothetical protein, at 520,552 to 520,881
GFF3654
Position (kb) 520
521 Strain fitness (log2 ratio) -2
-1
0
1 at 519.134 kb on - strand, within GFF3652 at 519.146 kb on + strand, within GFF3652 at 519.151 kb on + strand, within GFF3652 at 519.151 kb on + strand, within GFF3652 at 519.152 kb on - strand, within GFF3652 at 519.163 kb on + strand, within GFF3652 at 519.164 kb on - strand, within GFF3652 at 519.354 kb on + strand, within GFF3652 at 519.354 kb on + strand, within GFF3652 at 519.355 kb on - strand, within GFF3652 at 519.355 kb on - strand, within GFF3652 at 519.540 kb on + strand, within GFF3652 at 519.589 kb on - strand, within GFF3652 at 519.762 kb on + strand, within GFF3652 at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.263 kb on + strand, within GFF3653 at 520.263 kb on + strand, within GFF3653 at 520.263 kb on + strand, within GFF3653 at 520.553 kb on + strand at 520.554 kb on - strand at 520.586 kb on + strand, within GFF3654 at 520.587 kb on - strand, within GFF3654 at 520.688 kb on + strand, within GFF3654 at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.993 kb on - strand at 520.993 kb on - strand at 521.019 kb on + strand at 521.020 kb on - strand at 521.202 kb on + strand at 521.203 kb on - strand at 521.215 kb on - strand at 521.215 kb on - strand at 521.215 kb on - strand at 521.221 kb on + strand at 521.221 kb on + strand at 521.222 kb on - strand at 521.222 kb on - strand at 521.222 kb on - strand at 521.274 kb on + strand at 521.274 kb on + strand at 521.274 kb on + strand at 521.275 kb on - strand at 521.275 kb on - strand at 521.281 kb on - strand at 521.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 519,134 - GFF3652 0.15 +0.7 519,146 + GFF3652 0.16 -1.1 519,151 + GFF3652 0.17 -0.1 519,151 + GFF3652 0.17 +0.9 519,152 - GFF3652 0.17 -0.2 519,163 + GFF3652 0.18 -0.2 519,164 - GFF3652 0.18 -0.4 519,354 + GFF3652 0.34 +0.2 519,354 + GFF3652 0.34 -0.3 519,355 - GFF3652 0.34 -0.9 519,355 - GFF3652 0.34 +0.3 519,540 + GFF3652 0.50 -0.2 519,589 - GFF3652 0.54 -0.9 519,762 + GFF3652 0.69 +0.0 520,011 + +0.1 520,011 + +0.3 520,011 + +0.4 520,011 + -0.3 520,011 + -0.4 520,263 + GFF3653 0.47 +0.1 520,263 + GFF3653 0.47 -2.0 520,263 + GFF3653 0.47 -0.2 520,553 + +0.5 520,554 - -1.3 520,586 + GFF3654 0.10 -0.0 520,587 - GFF3654 0.11 +0.3 520,688 + GFF3654 0.41 -0.7 520,992 + -1.1 520,992 + +0.1 520,992 + -0.8 520,992 + -1.2 520,992 + +1.0 520,992 + +0.2 520,993 - -0.6 520,993 - -0.3 521,019 + -0.0 521,020 - +1.6 521,202 + -0.5 521,203 - +0.2 521,215 - +0.6 521,215 - -0.2 521,215 - -1.2 521,221 + -0.1 521,221 + +0.6 521,222 - -0.5 521,222 - -1.0 521,222 - +0.1 521,274 + +0.1 521,274 + -0.7 521,274 + +0.0 521,275 - -1.2 521,275 - +0.5 521,281 - -1.2 521,397 - -0.3
Or see this region's nucleotide sequence