Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3649 and GFF3650 overlap by 4 nucleotides GFF3650 and GFF3651 overlap by 4 nucleotides GFF3651 and GFF3652 overlap by 4 nucleotides GFF3652 and GFF3653 are separated by 15 nucleotides GFF3653 and GFF3654 are separated by 140 nucleotides
GFF3649 - hypothetical protein, at 517,535 to 518,065
GFF3649
GFF3650 - hypothetical protein, at 518,062 to 518,313
GFF3650
GFF3651 - Chromosome-partitioning ATPase Soj, at 518,310 to 518,963
GFF3651
GFF3652 - hypothetical protein, at 518,960 to 520,114
GFF3652
GFF3653 - hypothetical protein, at 520,130 to 520,411
GFF3653
GFF3654 - hypothetical protein, at 520,552 to 520,881
GFF3654
Position (kb) 518
519
520
521 Strain fitness (log2 ratio) -2
-1
0
1 at 518.316 kb on + strand at 518.316 kb on + strand at 518.316 kb on + strand at 518.326 kb on + strand at 518.343 kb on + strand at 519.064 kb on + strand at 519.064 kb on + strand at 519.134 kb on - strand, within GFF3652 at 519.146 kb on + strand, within GFF3652 at 519.151 kb on + strand, within GFF3652 at 519.151 kb on + strand, within GFF3652 at 519.152 kb on - strand, within GFF3652 at 519.163 kb on + strand, within GFF3652 at 519.164 kb on - strand, within GFF3652 at 519.354 kb on + strand, within GFF3652 at 519.354 kb on + strand, within GFF3652 at 519.355 kb on - strand, within GFF3652 at 519.355 kb on - strand, within GFF3652 at 519.540 kb on + strand, within GFF3652 at 519.589 kb on - strand, within GFF3652 at 519.762 kb on + strand, within GFF3652 at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.011 kb on + strand at 520.263 kb on + strand, within GFF3653 at 520.263 kb on + strand, within GFF3653 at 520.263 kb on + strand, within GFF3653 at 520.553 kb on + strand at 520.554 kb on - strand at 520.586 kb on + strand, within GFF3654 at 520.587 kb on - strand, within GFF3654 at 520.688 kb on + strand, within GFF3654 at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.992 kb on + strand at 520.993 kb on - strand at 520.993 kb on - strand at 521.019 kb on + strand at 521.020 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 518,316 + +0.0 518,316 + +0.4 518,316 + -0.8 518,326 + -0.3 518,343 + -0.6 519,064 + -0.3 519,064 + -0.3 519,134 - GFF3652 0.15 +0.7 519,146 + GFF3652 0.16 -1.1 519,151 + GFF3652 0.17 -0.1 519,151 + GFF3652 0.17 +0.9 519,152 - GFF3652 0.17 -0.2 519,163 + GFF3652 0.18 -0.2 519,164 - GFF3652 0.18 -0.4 519,354 + GFF3652 0.34 +0.2 519,354 + GFF3652 0.34 -0.3 519,355 - GFF3652 0.34 -0.9 519,355 - GFF3652 0.34 +0.3 519,540 + GFF3652 0.50 -0.2 519,589 - GFF3652 0.54 -0.9 519,762 + GFF3652 0.69 +0.0 520,011 + +0.1 520,011 + +0.3 520,011 + +0.4 520,011 + -0.3 520,011 + -0.4 520,263 + GFF3653 0.47 +0.1 520,263 + GFF3653 0.47 -2.0 520,263 + GFF3653 0.47 -0.2 520,553 + +0.5 520,554 - -1.3 520,586 + GFF3654 0.10 -0.0 520,587 - GFF3654 0.11 +0.3 520,688 + GFF3654 0.41 -0.7 520,992 + -1.1 520,992 + +0.1 520,992 + -0.8 520,992 + -1.2 520,992 + +1.0 520,992 + +0.2 520,993 - -0.6 520,993 - -0.3 521,019 + -0.0 521,020 - +1.6
Or see this region's nucleotide sequence