Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3595 and GFF3596 are separated by 127 nucleotides GFF3596 and GFF3597 are separated by 494 nucleotides
GFF3595 - hypothetical protein, at 454,790 to 455,863
GFF3595
GFF3596 - hypothetical protein, at 455,991 to 456,635
GFF3596
GFF3597 - hypothetical protein, at 457,130 to 458,368
GFF3597
Position (kb) 455
456
457 Strain fitness (log2 ratio) -1
0
1 at 455.190 kb on + strand, within GFF3595 at 455.190 kb on + strand, within GFF3595 at 455.191 kb on - strand, within GFF3595 at 455.191 kb on - strand, within GFF3595 at 455.191 kb on - strand, within GFF3595 at 455.191 kb on - strand, within GFF3595 at 455.191 kb on - strand, within GFF3595 at 455.451 kb on + strand, within GFF3595 at 455.451 kb on + strand, within GFF3595 at 455.451 kb on + strand, within GFF3595 at 455.451 kb on + strand, within GFF3595 at 455.452 kb on - strand, within GFF3595 at 455.452 kb on - strand, within GFF3595 at 455.452 kb on - strand, within GFF3595 at 455.626 kb on - strand, within GFF3595 at 455.658 kb on + strand, within GFF3595 at 455.658 kb on + strand, within GFF3595 at 455.658 kb on + strand, within GFF3595 at 455.659 kb on - strand, within GFF3595 at 455.992 kb on + strand at 455.993 kb on - strand at 456.214 kb on + strand, within GFF3596 at 456.214 kb on + strand, within GFF3596 at 456.215 kb on - strand, within GFF3596 at 456.215 kb on - strand, within GFF3596 at 456.223 kb on + strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.892 kb on + strand at 456.903 kb on + strand at 456.904 kb on - strand at 456.969 kb on + strand at 456.975 kb on - strand at 456.985 kb on - strand at 456.985 kb on - strand at 457.020 kb on - strand at 457.065 kb on + strand at 457.073 kb on + strand at 457.073 kb on + strand at 457.074 kb on - strand at 457.078 kb on + strand at 457.078 kb on + strand at 457.079 kb on - strand at 457.079 kb on - strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.133 kb on + strand at 457.133 kb on + strand at 457.133 kb on + strand at 457.134 kb on - strand at 457.134 kb on - strand at 457.152 kb on - strand at 457.219 kb on + strand at 457.293 kb on - strand, within GFF3597 at 457.309 kb on - strand, within GFF3597 at 457.313 kb on - strand, within GFF3597 at 457.443 kb on - strand, within GFF3597 at 457.487 kb on + strand, within GFF3597 at 457.488 kb on - strand, within GFF3597 at 457.488 kb on - strand, within GFF3597 at 457.538 kb on - strand, within GFF3597
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 455,190 + GFF3595 0.37 +0.2 455,190 + GFF3595 0.37 -1.1 455,191 - GFF3595 0.37 -0.2 455,191 - GFF3595 0.37 +0.0 455,191 - GFF3595 0.37 +0.7 455,191 - GFF3595 0.37 -0.0 455,191 - GFF3595 0.37 -0.1 455,451 + GFF3595 0.62 +0.6 455,451 + GFF3595 0.62 -0.6 455,451 + GFF3595 0.62 +0.7 455,451 + GFF3595 0.62 -1.3 455,452 - GFF3595 0.62 +0.4 455,452 - GFF3595 0.62 +0.1 455,452 - GFF3595 0.62 -0.7 455,626 - GFF3595 0.78 +0.3 455,658 + GFF3595 0.81 +0.3 455,658 + GFF3595 0.81 -0.2 455,658 + GFF3595 0.81 +0.3 455,659 - GFF3595 0.81 -0.1 455,992 + +0.9 455,993 - -0.3 456,214 + GFF3596 0.35 +0.4 456,214 + GFF3596 0.35 +0.5 456,215 - GFF3596 0.35 -0.6 456,215 - GFF3596 0.35 +0.1 456,223 + GFF3596 0.36 +0.1 456,224 - GFF3596 0.36 +0.7 456,224 - GFF3596 0.36 -0.6 456,224 - GFF3596 0.36 -0.3 456,892 + -0.2 456,903 + +0.1 456,904 - +0.4 456,969 + +0.4 456,975 - -0.8 456,985 - -0.1 456,985 - -0.7 457,020 - -0.8 457,065 + +0.3 457,073 + -0.2 457,073 + -0.1 457,074 - -1.1 457,078 + +0.3 457,078 + -0.5 457,079 - +0.8 457,079 - +0.4 457,123 + -0.3 457,123 + +0.1 457,123 + +0.4 457,123 + +0.3 457,123 + -1.2 457,124 - -1.5 457,124 - -1.0 457,124 - -0.5 457,124 - -0.5 457,124 - -0.6 457,124 - -0.1 457,124 - -0.6 457,133 + -0.4 457,133 + -1.0 457,133 + +0.2 457,134 - -0.2 457,134 - -0.6 457,152 - +0.7 457,219 + -0.4 457,293 - GFF3597 0.13 -0.3 457,309 - GFF3597 0.14 -1.2 457,313 - GFF3597 0.15 -0.6 457,443 - GFF3597 0.25 +0.1 457,487 + GFF3597 0.29 -1.2 457,488 - GFF3597 0.29 -0.0 457,488 - GFF3597 0.29 +0.3 457,538 - GFF3597 0.33 -0.3
Or see this region's nucleotide sequence