Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF351 and GFF352 are separated by 6 nucleotides GFF352 and GFF353 are separated by 252 nucleotides
GFF351 - hypothetical protein, at 359,310 to 360,335
GFF351
GFF352 - hypothetical protein, at 360,342 to 361,520
GFF352
GFF353 - Riboflavin-binding protein RibY, at 361,773 to 362,780
GFF353
Position (kb) 360
361
362 Strain fitness (log2 ratio) -2
-1
0
1 at 359.480 kb on + strand, within GFF351 at 359.598 kb on + strand, within GFF351 at 360.165 kb on + strand, within GFF351 at 360.165 kb on + strand, within GFF351 at 360.166 kb on - strand, within GFF351 at 360.166 kb on - strand, within GFF351 at 360.167 kb on + strand, within GFF351 at 360.167 kb on + strand, within GFF351 at 360.167 kb on + strand, within GFF351 at 360.168 kb on - strand, within GFF351 at 360.168 kb on - strand, within GFF351 at 360.343 kb on + strand at 360.344 kb on - strand at 360.826 kb on + strand, within GFF352 at 360.826 kb on + strand, within GFF352 at 360.826 kb on + strand, within GFF352 at 360.827 kb on - strand, within GFF352 at 360.916 kb on + strand, within GFF352 at 360.917 kb on - strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.174 kb on + strand, within GFF352 at 361.175 kb on - strand, within GFF352 at 361.400 kb on - strand, within GFF352 at 361.400 kb on - strand, within GFF352 at 361.614 kb on + strand at 361.615 kb on - strand at 361.771 kb on - strand at 361.893 kb on + strand, within GFF353 at 361.893 kb on + strand, within GFF353 at 361.917 kb on + strand, within GFF353 at 361.917 kb on + strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.921 kb on - strand, within GFF353 at 361.921 kb on - strand, within GFF353 at 362.001 kb on + strand, within GFF353 at 362.089 kb on - strand, within GFF353
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 359,480 + GFF351 0.17 +0.3 359,598 + GFF351 0.28 +1.0 360,165 + GFF351 0.83 -0.2 360,165 + GFF351 0.83 +0.0 360,166 - GFF351 0.83 -0.2 360,166 - GFF351 0.83 +0.5 360,167 + GFF351 0.84 -1.3 360,167 + GFF351 0.84 +0.5 360,167 + GFF351 0.84 +0.0 360,168 - GFF351 0.84 -0.8 360,168 - GFF351 0.84 -0.1 360,343 + -0.3 360,344 - +0.5 360,826 + GFF352 0.41 -2.0 360,826 + GFF352 0.41 -0.8 360,826 + GFF352 0.41 +0.4 360,827 - GFF352 0.41 +0.0 360,916 + GFF352 0.49 +0.0 360,917 - GFF352 0.49 -0.0 361,111 + GFF352 0.65 +0.3 361,111 + GFF352 0.65 -0.3 361,111 + GFF352 0.65 -0.3 361,174 + GFF352 0.71 +0.9 361,175 - GFF352 0.71 -0.5 361,400 - GFF352 0.90 -0.3 361,400 - GFF352 0.90 +0.8 361,614 + +0.1 361,615 - -0.0 361,771 - -0.3 361,893 + GFF353 0.12 +0.2 361,893 + GFF353 0.12 -0.4 361,917 + GFF353 0.14 +1.3 361,917 + GFF353 0.14 -0.5 361,918 - GFF353 0.14 -0.7 361,918 - GFF353 0.14 +0.3 361,918 - GFF353 0.14 -0.4 361,920 + GFF353 0.15 -1.3 361,920 + GFF353 0.15 +0.1 361,920 + GFF353 0.15 +0.4 361,920 + GFF353 0.15 +0.3 361,920 + GFF353 0.15 +0.0 361,921 - GFF353 0.15 +1.7 361,921 - GFF353 0.15 +0.0 362,001 + GFF353 0.23 -0.3 362,089 - GFF353 0.31 +0.6
Or see this region's nucleotide sequence