Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3496 and GFF3497 are separated by 22 nucleotides GFF3497 and GFF3498 are separated by 29 nucleotides GFF3498 and GFF3499 are separated by 663 nucleotides
GFF3496 - hypothetical protein, at 351,053 to 351,373
GFF3496
GFF3497 - hypothetical protein, at 351,396 to 352,097
GFF3497
GFF3498 - hypothetical protein, at 352,127 to 356,026
GFF3498
GFF3499 - hypothetical protein, at 356,690 to 357,580
GFF3499
Position (kb) 352
353
354
355
356
357 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 351.366 kb on + strand at 351.367 kb on - strand at 351.598 kb on + strand, within GFF3497 at 351.688 kb on + strand, within GFF3497 at 351.689 kb on - strand, within GFF3497 at 352.128 kb on + strand at 352.128 kb on + strand at 352.129 kb on - strand at 352.248 kb on + strand at 352.248 kb on + strand at 352.317 kb on + strand at 352.533 kb on + strand, within GFF3498 at 352.681 kb on - strand, within GFF3498 at 353.664 kb on + strand, within GFF3498 at 353.664 kb on + strand, within GFF3498 at 353.664 kb on + strand, within GFF3498 at 353.664 kb on + strand, within GFF3498 at 353.841 kb on + strand, within GFF3498 at 353.842 kb on - strand, within GFF3498 at 354.213 kb on + strand, within GFF3498 at 354.213 kb on + strand, within GFF3498 at 354.334 kb on - strand, within GFF3498 at 354.414 kb on + strand, within GFF3498 at 354.414 kb on + strand, within GFF3498 at 354.414 kb on + strand, within GFF3498 at 354.414 kb on + strand, within GFF3498 at 354.415 kb on - strand, within GFF3498 at 354.696 kb on + strand, within GFF3498 at 354.696 kb on + strand, within GFF3498 at 354.696 kb on + strand, within GFF3498 at 354.697 kb on - strand, within GFF3498 at 354.697 kb on - strand, within GFF3498 at 354.741 kb on + strand, within GFF3498 at 354.742 kb on - strand, within GFF3498 at 355.044 kb on + strand, within GFF3498 at 355.062 kb on + strand, within GFF3498 at 355.062 kb on + strand, within GFF3498 at 355.063 kb on - strand, within GFF3498 at 355.220 kb on + strand, within GFF3498 at 355.305 kb on + strand, within GFF3498 at 355.456 kb on - strand, within GFF3498 at 355.488 kb on + strand, within GFF3498 at 355.607 kb on + strand, within GFF3498 at 355.608 kb on - strand, within GFF3498 at 355.683 kb on + strand at 355.683 kb on + strand at 355.683 kb on + strand at 355.684 kb on - strand at 355.684 kb on - strand at 355.684 kb on - strand at 355.689 kb on + strand at 355.689 kb on + strand at 355.690 kb on - strand at 355.690 kb on - strand at 355.690 kb on - strand at 355.690 kb on - strand at 355.690 kb on - strand at 356.281 kb on + strand at 356.341 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 351,366 + +0.0 351,367 - +0.8 351,598 + GFF3497 0.29 +0.0 351,688 + GFF3497 0.42 +1.7 351,689 - GFF3497 0.42 +1.7 352,128 + -0.6 352,128 + +0.3 352,129 - +2.2 352,248 + +0.4 352,248 + -0.2 352,317 + +0.8 352,533 + GFF3498 0.10 +1.0 352,681 - GFF3498 0.14 -0.3 353,664 + GFF3498 0.39 -0.1 353,664 + GFF3498 0.39 -0.1 353,664 + GFF3498 0.39 -0.4 353,664 + GFF3498 0.39 +0.8 353,841 + GFF3498 0.44 -0.1 353,842 - GFF3498 0.44 -0.5 354,213 + GFF3498 0.53 -0.3 354,213 + GFF3498 0.53 -0.2 354,334 - GFF3498 0.57 -0.8 354,414 + GFF3498 0.59 +0.1 354,414 + GFF3498 0.59 +1.4 354,414 + GFF3498 0.59 +0.6 354,414 + GFF3498 0.59 -0.8 354,415 - GFF3498 0.59 -1.7 354,696 + GFF3498 0.66 +0.2 354,696 + GFF3498 0.66 -0.0 354,696 + GFF3498 0.66 -0.0 354,697 - GFF3498 0.66 +0.1 354,697 - GFF3498 0.66 -2.9 354,741 + GFF3498 0.67 +0.1 354,742 - GFF3498 0.67 +0.8 355,044 + GFF3498 0.75 +0.4 355,062 + GFF3498 0.75 -0.7 355,062 + GFF3498 0.75 +0.5 355,063 - GFF3498 0.75 +0.6 355,220 + GFF3498 0.79 -0.9 355,305 + GFF3498 0.81 +0.3 355,456 - GFF3498 0.85 +0.1 355,488 + GFF3498 0.86 +0.2 355,607 + GFF3498 0.89 -0.8 355,608 - GFF3498 0.89 +0.0 355,683 + +0.3 355,683 + -0.3 355,683 + +0.1 355,684 - +1.0 355,684 - +0.1 355,684 - -0.4 355,689 + +0.1 355,689 + -0.1 355,690 - -0.2 355,690 - -0.4 355,690 - -0.3 355,690 - -0.3 355,690 - -0.2 356,281 + +0.3 356,341 + +0.2
Or see this region's nucleotide sequence