Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF347 and GFF348 are separated by 30 nucleotides GFF348 and GFF349 are separated by 69 nucleotides
GFF347 - hypothetical protein, at 355,193 to 355,858
GFF347
GFF348 - Putative hydrolase MhqD, at 355,889 to 356,551
GFF348
GFF349 - Putative ring-cleaving dioxygenase MhqO, at 356,621 to 357,553
GFF349
Position (kb) 355
356
357 Strain fitness (log2 ratio) -2
-1
0
1 at 354.992 kb on + strand at 354.993 kb on - strand at 354.993 kb on - strand at 354.993 kb on - strand at 354.993 kb on - strand at 355.298 kb on + strand, within GFF347 at 355.574 kb on + strand, within GFF347 at 355.574 kb on + strand, within GFF347 at 355.575 kb on - strand, within GFF347 at 355.604 kb on + strand, within GFF347 at 355.605 kb on - strand, within GFF347 at 355.605 kb on - strand, within GFF347 at 355.670 kb on + strand, within GFF347 at 355.670 kb on + strand, within GFF347 at 355.760 kb on + strand, within GFF347 at 355.761 kb on - strand, within GFF347 at 355.974 kb on - strand, within GFF348 at 356.235 kb on + strand, within GFF348 at 356.236 kb on - strand, within GFF348 at 356.671 kb on - strand at 356.796 kb on + strand, within GFF349 at 356.796 kb on + strand, within GFF349 at 356.797 kb on - strand, within GFF349 at 356.797 kb on - strand, within GFF349 at 356.797 kb on - strand, within GFF349 at 357.282 kb on + strand, within GFF349 at 357.283 kb on - strand, within GFF349 at 357.283 kb on - strand, within GFF349 at 357.414 kb on + strand, within GFF349 at 357.415 kb on - strand, within GFF349 at 357.423 kb on + strand, within GFF349 at 357.423 kb on + strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.424 kb on - strand, within GFF349 at 357.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 354,992 + -0.2 354,993 - -0.5 354,993 - -0.9 354,993 - +0.5 354,993 - +0.1 355,298 + GFF347 0.16 +0.5 355,574 + GFF347 0.57 -0.5 355,574 + GFF347 0.57 +0.1 355,575 - GFF347 0.57 +0.2 355,604 + GFF347 0.62 +0.4 355,605 - GFF347 0.62 -0.4 355,605 - GFF347 0.62 +0.7 355,670 + GFF347 0.72 +0.2 355,670 + GFF347 0.72 +0.7 355,760 + GFF347 0.85 -0.5 355,761 - GFF347 0.85 +0.2 355,974 - GFF348 0.13 -2.1 356,235 + GFF348 0.52 -0.1 356,236 - GFF348 0.52 -1.6 356,671 - -1.3 356,796 + GFF349 0.19 +0.6 356,796 + GFF349 0.19 +0.2 356,797 - GFF349 0.19 +0.3 356,797 - GFF349 0.19 -0.2 356,797 - GFF349 0.19 -0.9 357,282 + GFF349 0.71 +0.4 357,283 - GFF349 0.71 +0.7 357,283 - GFF349 0.71 -0.6 357,414 + GFF349 0.85 +0.1 357,415 - GFF349 0.85 -0.3 357,423 + GFF349 0.86 +0.1 357,423 + GFF349 0.86 -0.2 357,424 - GFF349 0.86 +0.1 357,424 - GFF349 0.86 +1.1 357,424 - GFF349 0.86 -0.6 357,424 - GFF349 0.86 -0.0 357,424 - GFF349 0.86 -0.3 357,424 - GFF349 0.86 +0.8 357,424 - GFF349 0.86 -0.5 357,487 - +0.4
Or see this region's nucleotide sequence