Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3470 and GFF3471 overlap by 4 nucleotides GFF3471 and GFF3472 are separated by 48 nucleotides
GFF3470 - Multicopper oxidase MmcO, at 323,498 to 324,970
GFF3470
GFF3471 - hypothetical protein, at 324,967 to 326,220
GFF3471
GFF3472 - hypothetical protein, at 326,269 to 327,360
GFF3472
Position (kb) 324
325
326
327 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 324.386 kb on + strand, within GFF3470 at 324.386 kb on + strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.530 kb on + strand, within GFF3470 at 324.531 kb on - strand, within GFF3470 at 324.531 kb on - strand, within GFF3470 at 324.725 kb on + strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.831 kb on - strand at 324.842 kb on - strand at 325.267 kb on + strand, within GFF3471 at 325.268 kb on - strand, within GFF3471 at 325.335 kb on + strand, within GFF3471 at 325.390 kb on + strand, within GFF3471 at 325.804 kb on + strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.949 kb on - strand, within GFF3471 at 326.253 kb on - strand at 326.740 kb on + strand, within GFF3472 at 326.741 kb on - strand, within GFF3472 at 326.974 kb on + strand, within GFF3472 at 326.974 kb on + strand, within GFF3472 at 326.975 kb on - strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.154 kb on + strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472 at 327.155 kb on - strand, within GFF3472
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 324,386 + GFF3470 0.60 -0.7 324,386 + GFF3470 0.60 +0.1 324,449 - GFF3470 0.65 -1.3 324,449 - GFF3470 0.65 +0.6 324,449 - GFF3470 0.65 -0.7 324,530 + GFF3470 0.70 +0.0 324,531 - GFF3470 0.70 -0.3 324,531 - GFF3470 0.70 -0.0 324,725 + GFF3470 0.83 -0.6 324,726 - GFF3470 0.83 +0.1 324,726 - GFF3470 0.83 -1.6 324,726 - GFF3470 0.83 +0.8 324,831 - +1.5 324,842 - -0.9 325,267 + GFF3471 0.24 -3.4 325,268 - GFF3471 0.24 -0.9 325,335 + GFF3471 0.29 -0.6 325,390 + GFF3471 0.34 -0.4 325,804 + GFF3471 0.67 -1.6 325,805 - GFF3471 0.67 +0.1 325,805 - GFF3471 0.67 -1.9 325,949 - GFF3471 0.78 -0.1 326,253 - -0.3 326,740 + GFF3472 0.43 +0.1 326,741 - GFF3472 0.43 -0.1 326,974 + GFF3472 0.65 -0.5 326,974 + GFF3472 0.65 -0.4 326,975 - GFF3472 0.65 -0.9 327,154 + GFF3472 0.81 +0.3 327,154 + GFF3472 0.81 -0.1 327,154 + GFF3472 0.81 +0.4 327,154 + GFF3472 0.81 +0.5 327,154 + GFF3472 0.81 -1.9 327,154 + GFF3472 0.81 +0.0 327,154 + GFF3472 0.81 -0.4 327,155 - GFF3472 0.81 -0.7 327,155 - GFF3472 0.81 +0.1 327,155 - GFF3472 0.81 -0.3 327,155 - GFF3472 0.81 -1.2 327,155 - GFF3472 0.81 +0.3
Or see this region's nucleotide sequence