Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3345 and GFF3346 are separated by 155 nucleotides GFF3346 and GFF3347 overlap by 13 nucleotides
GFF3345 - 2-succinylbenzoate--CoA ligase, at 187,377 to 188,798
GFF3345
GFF3346 - Glucans biosynthesis protein G, at 188,954 to 190,465
GFF3346
GFF3347 - Glucans biosynthesis glucosyltransferase H, at 190,453 to 192,576
GFF3347
Position (kb) 188
189
190
191 Strain fitness (log2 ratio) -1
0
1 at 188.166 kb on + strand, within GFF3345 at 188.166 kb on + strand, within GFF3345 at 188.166 kb on + strand, within GFF3345 at 188.167 kb on - strand, within GFF3345 at 188.167 kb on - strand, within GFF3345 at 188.167 kb on - strand, within GFF3345 at 188.167 kb on - strand, within GFF3345 at 188.361 kb on + strand, within GFF3345 at 188.362 kb on - strand, within GFF3345 at 188.703 kb on + strand at 188.705 kb on + strand at 188.705 kb on + strand at 188.705 kb on + strand at 188.706 kb on - strand at 189.030 kb on - strand at 189.073 kb on + strand at 189.074 kb on - strand at 189.149 kb on + strand, within GFF3346 at 189.150 kb on - strand, within GFF3346 at 189.158 kb on + strand, within GFF3346 at 189.219 kb on - strand, within GFF3346 at 189.305 kb on + strand, within GFF3346 at 189.305 kb on + strand, within GFF3346 at 189.305 kb on + strand, within GFF3346 at 189.305 kb on + strand, within GFF3346 at 189.305 kb on + strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.306 kb on - strand, within GFF3346 at 189.414 kb on - strand, within GFF3346 at 189.450 kb on - strand, within GFF3346 at 189.450 kb on - strand, within GFF3346 at 189.557 kb on + strand, within GFF3346 at 189.557 kb on + strand, within GFF3346 at 189.557 kb on + strand, within GFF3346 at 189.557 kb on + strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.558 kb on - strand, within GFF3346 at 189.692 kb on + strand, within GFF3346 at 189.968 kb on + strand, within GFF3346 at 189.969 kb on - strand, within GFF3346 at 190.118 kb on + strand, within GFF3346 at 190.119 kb on - strand, within GFF3346 at 190.119 kb on - strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.124 kb on + strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.125 kb on - strand, within GFF3346 at 190.130 kb on + strand, within GFF3346 at 190.130 kb on + strand, within GFF3346 at 190.131 kb on - strand, within GFF3346 at 190.398 kb on + strand at 190.398 kb on + strand at 190.398 kb on + strand at 190.398 kb on + strand at 190.399 kb on - strand at 190.666 kb on + strand, within GFF3347 at 190.666 kb on + strand, within GFF3347 at 190.666 kb on + strand, within GFF3347 at 190.666 kb on + strand, within GFF3347 at 190.666 kb on + strand, within GFF3347 at 190.666 kb on + strand, within GFF3347 at 190.667 kb on - strand, within GFF3347 at 190.667 kb on - strand, within GFF3347 at 190.697 kb on - strand, within GFF3347 at 190.873 kb on + strand, within GFF3347 at 190.873 kb on + strand, within GFF3347 at 190.873 kb on + strand, within GFF3347 at 190.874 kb on - strand, within GFF3347 at 190.874 kb on - strand, within GFF3347 at 190.874 kb on - strand, within GFF3347 at 191.132 kb on - strand, within GFF3347 at 191.132 kb on - strand, within GFF3347 at 191.302 kb on + strand, within GFF3347 at 191.356 kb on + strand, within GFF3347 at 191.356 kb on + strand, within GFF3347 at 191.357 kb on - strand, within GFF3347 at 191.357 kb on - strand, within GFF3347 at 191.357 kb on - strand, within GFF3347 at 191.449 kb on - strand, within GFF3347
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 188,166 + GFF3345 0.55 -0.4 188,166 + GFF3345 0.55 +0.7 188,166 + GFF3345 0.55 -0.9 188,167 - GFF3345 0.56 +0.4 188,167 - GFF3345 0.56 -0.4 188,167 - GFF3345 0.56 -0.3 188,167 - GFF3345 0.56 -0.7 188,361 + GFF3345 0.69 -0.2 188,362 - GFF3345 0.69 -0.7 188,703 + -0.3 188,705 + +0.2 188,705 + +1.0 188,705 + -0.2 188,706 - -0.1 189,030 - -1.1 189,073 + -0.0 189,074 - -0.5 189,149 + GFF3346 0.13 +1.1 189,150 - GFF3346 0.13 -0.7 189,158 + GFF3346 0.13 -0.7 189,219 - GFF3346 0.18 +0.5 189,305 + GFF3346 0.23 -0.1 189,305 + GFF3346 0.23 -0.7 189,305 + GFF3346 0.23 -0.4 189,305 + GFF3346 0.23 +0.1 189,305 + GFF3346 0.23 +0.9 189,306 - GFF3346 0.23 +0.0 189,306 - GFF3346 0.23 +0.5 189,306 - GFF3346 0.23 -0.1 189,306 - GFF3346 0.23 -0.1 189,306 - GFF3346 0.23 -0.1 189,306 - GFF3346 0.23 +0.2 189,414 - GFF3346 0.30 +0.7 189,450 - GFF3346 0.33 +0.4 189,450 - GFF3346 0.33 -0.7 189,557 + GFF3346 0.40 -0.2 189,557 + GFF3346 0.40 -1.2 189,557 + GFF3346 0.40 +0.3 189,557 + GFF3346 0.40 -0.8 189,558 - GFF3346 0.40 +0.5 189,558 - GFF3346 0.40 +0.4 189,558 - GFF3346 0.40 -0.6 189,558 - GFF3346 0.40 -1.5 189,558 - GFF3346 0.40 -0.9 189,558 - GFF3346 0.40 -0.6 189,692 + GFF3346 0.49 +1.0 189,968 + GFF3346 0.67 +0.1 189,969 - GFF3346 0.67 -0.3 190,118 + GFF3346 0.77 -1.1 190,119 - GFF3346 0.77 -0.2 190,119 - GFF3346 0.77 +0.0 190,124 + GFF3346 0.77 +0.1 190,124 + GFF3346 0.77 -0.7 190,124 + GFF3346 0.77 +0.5 190,124 + GFF3346 0.77 -0.1 190,124 + GFF3346 0.77 -0.3 190,124 + GFF3346 0.77 -0.3 190,124 + GFF3346 0.77 +0.2 190,125 - GFF3346 0.77 -0.3 190,125 - GFF3346 0.77 +0.8 190,125 - GFF3346 0.77 -0.1 190,125 - GFF3346 0.77 +1.2 190,125 - GFF3346 0.77 +0.3 190,125 - GFF3346 0.77 -0.5 190,125 - GFF3346 0.77 +0.1 190,130 + GFF3346 0.78 -0.7 190,130 + GFF3346 0.78 +0.9 190,131 - GFF3346 0.78 +0.3 190,398 + -1.0 190,398 + -0.2 190,398 + -0.9 190,398 + +0.1 190,399 - -0.5 190,666 + GFF3347 0.10 -0.1 190,666 + GFF3347 0.10 +0.1 190,666 + GFF3347 0.10 +0.8 190,666 + GFF3347 0.10 -0.1 190,666 + GFF3347 0.10 -0.4 190,666 + GFF3347 0.10 +0.3 190,667 - GFF3347 0.10 +0.2 190,667 - GFF3347 0.10 +0.0 190,697 - GFF3347 0.11 -0.7 190,873 + GFF3347 0.20 -0.6 190,873 + GFF3347 0.20 +0.4 190,873 + GFF3347 0.20 -0.2 190,874 - GFF3347 0.20 +0.4 190,874 - GFF3347 0.20 +0.5 190,874 - GFF3347 0.20 -0.5 191,132 - GFF3347 0.32 -0.9 191,132 - GFF3347 0.32 -0.2 191,302 + GFF3347 0.40 -0.6 191,356 + GFF3347 0.43 +0.3 191,356 + GFF3347 0.43 -0.1 191,357 - GFF3347 0.43 -0.2 191,357 - GFF3347 0.43 +0.2 191,357 - GFF3347 0.43 +0.6 191,449 - GFF3347 0.47 +0.6
Or see this region's nucleotide sequence