Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3340 and GFF3341 are separated by 44 nucleotides GFF3341 and GFF3342 are separated by 142 nucleotides GFF3342 and GFF3343 are separated by 1 nucleotides
GFF3340 - putative acrylyl-CoA reductase AcuI, at 182,099 to 183,085
GFF3340
GFF3341 - Pyruvate dehydrogenase complex repressor, at 183,130 to 183,900
GFF3341
GFF3342 - hypothetical protein, at 184,043 to 185,293
GFF3342
GFF3343 - hypothetical protein, at 185,295 to 186,524
GFF3343
Position (kb) 184
185
186 Strain fitness (log2 ratio) -1
0
1 at 183.170 kb on + strand at 183.171 kb on - strand at 183.185 kb on + strand at 183.185 kb on + strand at 183.185 kb on + strand at 183.186 kb on - strand at 183.712 kb on + strand, within GFF3341 at 183.712 kb on + strand, within GFF3341 at 184.505 kb on + strand, within GFF3342 at 184.589 kb on + strand, within GFF3342 at 184.590 kb on - strand, within GFF3342 at 184.901 kb on + strand, within GFF3342 at 184.901 kb on + strand, within GFF3342 at 184.901 kb on + strand, within GFF3342 at 184.902 kb on - strand, within GFF3342 at 184.911 kb on + strand, within GFF3342 at 184.912 kb on - strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.156 kb on + strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.157 kb on - strand, within GFF3342 at 185.198 kb on + strand at 185.198 kb on + strand at 185.198 kb on + strand at 185.199 kb on - strand at 185.205 kb on - strand at 185.205 kb on - strand at 185.470 kb on + strand, within GFF3343 at 185.665 kb on - strand, within GFF3343 at 185.982 kb on + strand, within GFF3343 at 185.983 kb on - strand, within GFF3343 at 185.983 kb on - strand, within GFF3343
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 183,170 + +0.0 183,171 - +0.1 183,185 + -0.1 183,185 + +0.0 183,185 + +0.0 183,186 - -1.5 183,712 + GFF3341 0.75 -0.5 183,712 + GFF3341 0.75 -0.1 184,505 + GFF3342 0.37 -0.7 184,589 + GFF3342 0.44 -0.2 184,590 - GFF3342 0.44 -0.5 184,901 + GFF3342 0.69 -0.3 184,901 + GFF3342 0.69 +0.7 184,901 + GFF3342 0.69 -0.4 184,902 - GFF3342 0.69 +0.3 184,911 + GFF3342 0.69 -0.2 184,912 - GFF3342 0.69 +0.0 185,156 + GFF3342 0.89 -0.4 185,156 + GFF3342 0.89 -0.6 185,156 + GFF3342 0.89 +0.4 185,156 + GFF3342 0.89 -0.1 185,156 + GFF3342 0.89 -1.0 185,156 + GFF3342 0.89 -0.8 185,156 + GFF3342 0.89 -0.4 185,156 + GFF3342 0.89 -0.8 185,156 + GFF3342 0.89 +0.3 185,156 + GFF3342 0.89 +0.3 185,157 - GFF3342 0.89 +0.5 185,157 - GFF3342 0.89 -0.4 185,157 - GFF3342 0.89 +0.0 185,157 - GFF3342 0.89 -0.4 185,157 - GFF3342 0.89 -0.0 185,157 - GFF3342 0.89 +0.1 185,157 - GFF3342 0.89 +0.2 185,198 + -0.2 185,198 + +0.4 185,198 + +0.9 185,199 - +1.4 185,205 - +0.1 185,205 - -0.2 185,470 + GFF3343 0.14 -0.2 185,665 - GFF3343 0.30 +0.7 185,982 + GFF3343 0.56 +0.9 185,983 - GFF3343 0.56 -1.5 185,983 - GFF3343 0.56 +1.1
Or see this region's nucleotide sequence