Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3307 and GFF3308 are separated by 85 nucleotides GFF3308 and GFF3309 are separated by 85 nucleotides
GFF3307 - hypothetical protein, at 145,302 to 146,303
GFF3307
GFF3308 - hypothetical protein, at 146,389 to 147,102
GFF3308
GFF3309 - hypothetical protein, at 147,188 to 148,417
GFF3309
Position (kb) 146
147
148 Strain fitness (log2 ratio) -1
0
1 at 145.516 kb on + strand, within GFF3307 at 145.516 kb on + strand, within GFF3307 at 145.517 kb on - strand, within GFF3307 at 145.555 kb on + strand, within GFF3307 at 145.674 kb on + strand, within GFF3307 at 145.675 kb on - strand, within GFF3307 at 145.747 kb on + strand, within GFF3307 at 145.747 kb on + strand, within GFF3307 at 145.801 kb on + strand, within GFF3307 at 145.801 kb on + strand, within GFF3307 at 145.802 kb on - strand, within GFF3307 at 145.802 kb on - strand, within GFF3307 at 146.011 kb on + strand, within GFF3307 at 146.011 kb on + strand, within GFF3307 at 146.011 kb on + strand, within GFF3307 at 146.346 kb on + strand at 146.346 kb on + strand at 146.346 kb on + strand at 146.347 kb on - strand at 146.803 kb on + strand, within GFF3308 at 146.803 kb on + strand, within GFF3308 at 146.839 kb on + strand, within GFF3308 at 146.839 kb on + strand, within GFF3308 at 146.840 kb on - strand, within GFF3308 at 146.840 kb on - strand, within GFF3308 at 146.840 kb on - strand, within GFF3308 at 146.840 kb on - strand, within GFF3308 at 146.840 kb on - strand, within GFF3308 at 146.929 kb on + strand, within GFF3308 at 146.929 kb on + strand, within GFF3308 at 146.929 kb on + strand, within GFF3308 at 146.930 kb on - strand, within GFF3308 at 147.047 kb on - strand at 147.268 kb on - strand at 147.268 kb on - strand at 147.268 kb on - strand at 147.318 kb on + strand, within GFF3309 at 147.318 kb on + strand, within GFF3309 at 147.318 kb on + strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.319 kb on - strand, within GFF3309 at 147.454 kb on - strand, within GFF3309 at 147.472 kb on - strand, within GFF3309 at 147.565 kb on - strand, within GFF3309 at 147.876 kb on + strand, within GFF3309 at 147.960 kb on + strand, within GFF3309 at 147.961 kb on - strand, within GFF3309 at 147.961 kb on - strand, within GFF3309 at 147.961 kb on - strand, within GFF3309
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 145,516 + GFF3307 0.21 -0.7 145,516 + GFF3307 0.21 +0.8 145,517 - GFF3307 0.21 -0.3 145,555 + GFF3307 0.25 -0.8 145,674 + GFF3307 0.37 +0.5 145,675 - GFF3307 0.37 -0.1 145,747 + GFF3307 0.44 -0.9 145,747 + GFF3307 0.44 +0.9 145,801 + GFF3307 0.50 +1.0 145,801 + GFF3307 0.50 -0.1 145,802 - GFF3307 0.50 -1.0 145,802 - GFF3307 0.50 +0.3 146,011 + GFF3307 0.71 -0.2 146,011 + GFF3307 0.71 -0.7 146,011 + GFF3307 0.71 +0.2 146,346 + +0.3 146,346 + -0.1 146,346 + -0.9 146,347 - -0.7 146,803 + GFF3308 0.58 -0.1 146,803 + GFF3308 0.58 -0.9 146,839 + GFF3308 0.63 -0.5 146,839 + GFF3308 0.63 +0.7 146,840 - GFF3308 0.63 +1.1 146,840 - GFF3308 0.63 +0.4 146,840 - GFF3308 0.63 +0.3 146,840 - GFF3308 0.63 +0.3 146,840 - GFF3308 0.63 -0.4 146,929 + GFF3308 0.76 -0.8 146,929 + GFF3308 0.76 -1.3 146,929 + GFF3308 0.76 -0.1 146,930 - GFF3308 0.76 +0.2 147,047 - +0.4 147,268 - +0.2 147,268 - -0.4 147,268 - +0.3 147,318 + GFF3309 0.11 +0.1 147,318 + GFF3309 0.11 -0.6 147,318 + GFF3309 0.11 -1.1 147,319 - GFF3309 0.11 +0.3 147,319 - GFF3309 0.11 -0.8 147,319 - GFF3309 0.11 +0.1 147,319 - GFF3309 0.11 -0.1 147,319 - GFF3309 0.11 -0.2 147,319 - GFF3309 0.11 -0.4 147,319 - GFF3309 0.11 -0.6 147,319 - GFF3309 0.11 +0.1 147,319 - GFF3309 0.11 -0.1 147,454 - GFF3309 0.22 -1.5 147,472 - GFF3309 0.23 -0.3 147,565 - GFF3309 0.31 -0.5 147,876 + GFF3309 0.56 +0.5 147,960 + GFF3309 0.63 +1.7 147,961 - GFF3309 0.63 +0.5 147,961 - GFF3309 0.63 -0.7 147,961 - GFF3309 0.63 +1.0
Or see this region's nucleotide sequence