Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF30 and GFF31 are separated by 37 nucleotides GFF31 and GFF32 are separated by 63 nucleotides
GFF30 - Sialic acid TRAP transporter permease protein SiaT, at 34,985 to 36,856
GFF30
GFF31 - Long-chain-fatty-acid--CoA ligase, at 36,894 to 38,456
GFF31
GFF32 - Acetolactate synthase large subunit IlvG, at 38,520 to 40,232
GFF32
Position (kb) 36
37
38
39 Strain fitness (log2 ratio) -1
0
1 at 36.327 kb on - strand, within GFF30 at 36.380 kb on + strand, within GFF30 at 36.380 kb on + strand, within GFF30 at 36.381 kb on - strand, within GFF30 at 36.397 kb on + strand, within GFF30 at 36.657 kb on - strand, within GFF30 at 36.657 kb on - strand, within GFF30 at 36.657 kb on - strand, within GFF30 at 36.719 kb on + strand at 36.719 kb on + strand at 36.720 kb on - strand at 36.720 kb on - strand at 36.722 kb on + strand at 36.723 kb on - strand at 36.782 kb on + strand at 37.080 kb on + strand, within GFF31 at 37.081 kb on - strand, within GFF31 at 37.108 kb on - strand, within GFF31 at 37.108 kb on - strand, within GFF31 at 37.272 kb on + strand, within GFF31 at 37.405 kb on - strand, within GFF31 at 37.405 kb on - strand, within GFF31 at 37.405 kb on - strand, within GFF31 at 37.405 kb on - strand, within GFF31 at 37.458 kb on - strand, within GFF31 at 37.475 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.576 kb on - strand, within GFF31 at 37.576 kb on - strand, within GFF31 at 37.600 kb on - strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.687 kb on - strand, within GFF31 at 37.729 kb on - strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.110 kb on - strand, within GFF31 at 38.209 kb on + strand, within GFF31 at 38.209 kb on + strand, within GFF31 at 38.210 kb on - strand, within GFF31 at 38.210 kb on - strand, within GFF31 at 38.344 kb on - strand at 38.475 kb on + strand at 39.228 kb on + strand, within GFF32
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 36,327 - GFF30 0.72 +0.1 36,380 + GFF30 0.75 -0.2 36,380 + GFF30 0.75 -0.2 36,381 - GFF30 0.75 +0.2 36,397 + GFF30 0.75 +0.6 36,657 - GFF30 0.89 -0.6 36,657 - GFF30 0.89 -1.0 36,657 - GFF30 0.89 -0.5 36,719 + -0.2 36,719 + +0.7 36,720 - +0.5 36,720 - +0.7 36,722 + -0.3 36,723 - +0.2 36,782 + -1.3 37,080 + GFF31 0.12 +0.1 37,081 - GFF31 0.12 +0.3 37,108 - GFF31 0.14 +0.3 37,108 - GFF31 0.14 +0.3 37,272 + GFF31 0.24 +0.5 37,405 - GFF31 0.33 +0.5 37,405 - GFF31 0.33 -0.3 37,405 - GFF31 0.33 +0.1 37,405 - GFF31 0.33 +0.2 37,458 - GFF31 0.36 -1.3 37,475 + GFF31 0.37 -0.2 37,532 + GFF31 0.41 -0.4 37,532 + GFF31 0.41 +0.0 37,532 + GFF31 0.41 -0.0 37,532 + GFF31 0.41 -0.5 37,532 + GFF31 0.41 -0.4 37,532 + GFF31 0.41 -0.3 37,532 + GFF31 0.41 +0.3 37,533 - GFF31 0.41 +0.7 37,533 - GFF31 0.41 +0.6 37,533 - GFF31 0.41 +0.1 37,533 - GFF31 0.41 +0.9 37,533 - GFF31 0.41 -0.4 37,533 - GFF31 0.41 -0.8 37,533 - GFF31 0.41 +0.1 37,533 - GFF31 0.41 -0.6 37,533 - GFF31 0.41 -0.1 37,576 - GFF31 0.44 +0.8 37,576 - GFF31 0.44 +0.5 37,600 - GFF31 0.45 -1.3 37,686 + GFF31 0.51 -0.4 37,686 + GFF31 0.51 +1.1 37,686 + GFF31 0.51 -0.2 37,687 - GFF31 0.51 +0.7 37,729 - GFF31 0.53 -0.6 38,109 + GFF31 0.78 -0.4 38,109 + GFF31 0.78 +0.3 38,109 + GFF31 0.78 -0.2 38,110 - GFF31 0.78 +0.5 38,209 + GFF31 0.84 -0.5 38,209 + GFF31 0.84 +1.3 38,210 - GFF31 0.84 -0.6 38,210 - GFF31 0.84 -0.5 38,344 - +0.7 38,475 + +0.2 39,228 + GFF32 0.41 -0.9
Or see this region's nucleotide sequence