Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2992 and GFF2993 are separated by 56 nucleotides GFF2993 and GFF2994 overlap by 1 nucleotides GFF2994 and GFF2995 overlap by 4 nucleotides
GFF2992 - Vitamin B12 transporter BtuB, at 719,170 to 721,143
GFF2992
GFF2993 - hypothetical protein, at 721,200 to 722,078
GFF2993
GFF2994 - Hemin transport system permease protein HmuU, at 722,078 to 723,064
GFF2994
GFF2995 - Hemin import ATP-binding protein HmuV, at 723,061 to 723,816
GFF2995
Position (kb) 721
722
723 Strain fitness (log2 ratio) -2
-1
0
1
2 at 720.206 kb on - strand, within GFF2992 at 720.206 kb on - strand, within GFF2992 at 720.281 kb on - strand, within GFF2992 at 720.281 kb on - strand, within GFF2992 at 720.320 kb on - strand, within GFF2992 at 720.328 kb on + strand, within GFF2992 at 720.329 kb on - strand, within GFF2992 at 720.469 kb on + strand, within GFF2992 at 720.469 kb on + strand, within GFF2992 at 720.470 kb on - strand, within GFF2992 at 720.500 kb on - strand, within GFF2992 at 720.500 kb on - strand, within GFF2992 at 720.508 kb on + strand, within GFF2992 at 720.518 kb on - strand, within GFF2992 at 720.520 kb on + strand, within GFF2992 at 720.520 kb on + strand, within GFF2992 at 720.520 kb on + strand, within GFF2992 at 720.521 kb on - strand, within GFF2992 at 720.521 kb on - strand, within GFF2992 at 720.521 kb on - strand, within GFF2992 at 720.616 kb on + strand, within GFF2992 at 720.617 kb on - strand, within GFF2992 at 720.649 kb on + strand, within GFF2992 at 720.649 kb on + strand, within GFF2992 at 720.650 kb on - strand, within GFF2992 at 720.650 kb on - strand, within GFF2992 at 720.665 kb on - strand, within GFF2992 at 720.757 kb on + strand, within GFF2992 at 720.757 kb on + strand, within GFF2992 at 720.757 kb on + strand, within GFF2992 at 720.757 kb on + strand, within GFF2992 at 720.758 kb on - strand, within GFF2992 at 720.758 kb on - strand, within GFF2992 at 720.758 kb on - strand, within GFF2992 at 720.763 kb on + strand, within GFF2992 at 720.763 kb on + strand, within GFF2992 at 720.763 kb on + strand, within GFF2992 at 720.764 kb on - strand, within GFF2992 at 720.764 kb on - strand, within GFF2992 at 720.781 kb on + strand, within GFF2992 at 720.781 kb on + strand, within GFF2992 at 720.841 kb on + strand, within GFF2992 at 720.928 kb on + strand, within GFF2992 at 720.929 kb on - strand, within GFF2992 at 720.929 kb on - strand, within GFF2992 at 720.988 kb on + strand at 720.989 kb on - strand at 720.989 kb on - strand at 720.990 kb on + strand at 721.075 kb on + strand at 721.075 kb on + strand at 721.470 kb on + strand, within GFF2993 at 721.470 kb on + strand, within GFF2993 at 721.557 kb on + strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.558 kb on - strand, within GFF2993 at 721.613 kb on - strand, within GFF2993 at 722.384 kb on + strand, within GFF2994 at 722.385 kb on - strand, within GFF2994 at 722.385 kb on - strand, within GFF2994 at 722.579 kb on + strand, within GFF2994 at 722.579 kb on + strand, within GFF2994
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 720,206 - GFF2992 0.52 +0.2 720,206 - GFF2992 0.52 +0.1 720,281 - GFF2992 0.56 +0.0 720,281 - GFF2992 0.56 -0.2 720,320 - GFF2992 0.58 +0.1 720,328 + GFF2992 0.59 +1.1 720,329 - GFF2992 0.59 -0.3 720,469 + GFF2992 0.66 +0.3 720,469 + GFF2992 0.66 -0.9 720,470 - GFF2992 0.66 +0.2 720,500 - GFF2992 0.67 -0.1 720,500 - GFF2992 0.67 -0.1 720,508 + GFF2992 0.68 +0.3 720,518 - GFF2992 0.68 -0.6 720,520 + GFF2992 0.68 -0.1 720,520 + GFF2992 0.68 -0.1 720,520 + GFF2992 0.68 -0.1 720,521 - GFF2992 0.68 +0.0 720,521 - GFF2992 0.68 -0.4 720,521 - GFF2992 0.68 +0.3 720,616 + GFF2992 0.73 -0.5 720,617 - GFF2992 0.73 -0.0 720,649 + GFF2992 0.75 -0.8 720,649 + GFF2992 0.75 -1.3 720,650 - GFF2992 0.75 -0.5 720,650 - GFF2992 0.75 +0.1 720,665 - GFF2992 0.76 -0.1 720,757 + GFF2992 0.80 +0.6 720,757 + GFF2992 0.80 -0.3 720,757 + GFF2992 0.80 -0.1 720,757 + GFF2992 0.80 +1.2 720,758 - GFF2992 0.80 -0.3 720,758 - GFF2992 0.80 -1.3 720,758 - GFF2992 0.80 -0.9 720,763 + GFF2992 0.81 +0.2 720,763 + GFF2992 0.81 +0.6 720,763 + GFF2992 0.81 -0.0 720,764 - GFF2992 0.81 +0.1 720,764 - GFF2992 0.81 +0.4 720,781 + GFF2992 0.82 +0.5 720,781 + GFF2992 0.82 +0.7 720,841 + GFF2992 0.85 +0.0 720,928 + GFF2992 0.89 -0.5 720,929 - GFF2992 0.89 -0.2 720,929 - GFF2992 0.89 +2.1 720,988 + +0.5 720,989 - +1.3 720,989 - +0.5 720,990 + +0.1 721,075 + -0.5 721,075 + +0.3 721,470 + GFF2993 0.31 -0.1 721,470 + GFF2993 0.31 -0.1 721,557 + GFF2993 0.41 -0.4 721,558 - GFF2993 0.41 +0.1 721,558 - GFF2993 0.41 -0.5 721,558 - GFF2993 0.41 +0.5 721,558 - GFF2993 0.41 -0.5 721,613 - GFF2993 0.47 -0.1 722,384 + GFF2994 0.31 +0.0 722,385 - GFF2994 0.31 -2.3 722,385 - GFF2994 0.31 +0.2 722,579 + GFF2994 0.51 -0.4 722,579 + GFF2994 0.51 +0.2
Or see this region's nucleotide sequence