Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF294 and GFF295 are separated by 147 nucleotides GFF295 and GFF296 are separated by 538 nucleotides
GFF294 - Amidophosphoribosyltransferase, at 309,387 to 310,286
GFF294
GFF295 - hypothetical protein, at 310,434 to 311,120
GFF295
GFF296 - hypothetical protein, at 311,659 to 312,783
GFF296
Position (kb) 310
311
312 Strain fitness (log2 ratio) -2
-1
0
1 at 309.478 kb on + strand, within GFF294 at 309.499 kb on + strand, within GFF294 at 309.500 kb on - strand, within GFF294 at 309.668 kb on - strand, within GFF294 at 310.080 kb on + strand, within GFF294 at 310.341 kb on + strand at 310.341 kb on + strand at 310.472 kb on - strand at 310.472 kb on - strand at 310.555 kb on + strand, within GFF295 at 310.556 kb on - strand, within GFF295 at 310.556 kb on - strand, within GFF295 at 310.577 kb on - strand, within GFF295 at 310.600 kb on + strand, within GFF295 at 310.636 kb on + strand, within GFF295 at 310.669 kb on + strand, within GFF295 at 310.669 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 311.041 kb on + strand, within GFF295 at 311.042 kb on - strand, within GFF295 at 311.434 kb on + strand at 311.635 kb on + strand at 311.762 kb on + strand at 311.762 kb on + strand at 311.763 kb on - strand at 311.763 kb on - strand at 311.962 kb on + strand, within GFF296 at 311.962 kb on + strand, within GFF296 at 311.962 kb on + strand, within GFF296 at 311.962 kb on + strand, within GFF296 at 311.963 kb on - strand, within GFF296 at 312.097 kb on + strand, within GFF296 at 312.105 kb on + strand, within GFF296 at 312.107 kb on + strand, within GFF296 at 312.107 kb on + strand, within GFF296 at 312.107 kb on + strand, within GFF296 at 312.107 kb on + strand, within GFF296 at 312.107 kb on + strand, within GFF296
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 309,478 + GFF294 0.10 +0.4 309,499 + GFF294 0.12 -1.0 309,500 - GFF294 0.13 -0.7 309,668 - GFF294 0.31 -0.2 310,080 + GFF294 0.77 +0.6 310,341 + -0.6 310,341 + +0.3 310,472 - -0.9 310,472 - -0.1 310,555 + GFF295 0.18 -0.5 310,556 - GFF295 0.18 -1.7 310,556 - GFF295 0.18 -0.9 310,577 - GFF295 0.21 -0.8 310,600 + GFF295 0.24 -1.3 310,636 + GFF295 0.29 -0.5 310,669 + GFF295 0.34 -0.3 310,669 + GFF295 0.34 -1.3 310,717 + GFF295 0.41 -1.5 310,717 + GFF295 0.41 +0.1 310,717 + GFF295 0.41 -2.3 310,876 - GFF295 0.64 -0.5 310,876 - GFF295 0.64 -2.3 310,876 - GFF295 0.64 -0.1 311,041 + GFF295 0.88 -1.4 311,042 - GFF295 0.89 +0.7 311,434 + -0.2 311,635 + -0.5 311,762 + +0.1 311,762 + -0.2 311,763 - -0.7 311,763 - +0.7 311,962 + GFF296 0.27 -0.0 311,962 + GFF296 0.27 -0.0 311,962 + GFF296 0.27 -1.7 311,962 + GFF296 0.27 +0.0 311,963 - GFF296 0.27 +0.4 312,097 + GFF296 0.39 -1.0 312,105 + GFF296 0.40 -0.6 312,107 + GFF296 0.40 -0.4 312,107 + GFF296 0.40 -0.1 312,107 + GFF296 0.40 -0.1 312,107 + GFF296 0.40 +0.9 312,107 + GFF296 0.40 -0.3
Or see this region's nucleotide sequence