Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2924 and GFF2925 are separated by 8 nucleotides GFF2925 and GFF2926 overlap by 1 nucleotides
GFF2924 - Sarcosine oxidase subunit beta, at 644,022 to 645,275
GFF2924
GFF2925 - Sarcosine oxidase subunit delta, at 645,284 to 645,571
GFF2925
GFF2926 - Sarcosine oxidase subunit alpha, at 645,571 to 648,576
GFF2926
Position (kb) 645
646 Strain fitness (log2 ratio) -2
-1
0
1
2 at 644.346 kb on + strand, within GFF2924 at 644.346 kb on + strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.427 kb on + strand, within GFF2924 at 644.744 kb on + strand, within GFF2924 at 644.744 kb on + strand, within GFF2924 at 644.744 kb on + strand, within GFF2924 at 644.745 kb on - strand, within GFF2924 at 644.745 kb on - strand, within GFF2924 at 644.745 kb on - strand, within GFF2924 at 644.745 kb on - strand, within GFF2924 at 644.871 kb on + strand, within GFF2924 at 644.872 kb on - strand, within GFF2924 at 644.925 kb on + strand, within GFF2924 at 644.925 kb on + strand, within GFF2924 at 644.925 kb on + strand, within GFF2924 at 644.925 kb on + strand, within GFF2924 at 644.926 kb on - strand, within GFF2924 at 644.926 kb on - strand, within GFF2924 at 644.934 kb on + strand, within GFF2924 at 644.935 kb on - strand, within GFF2924 at 645.099 kb on + strand, within GFF2924 at 645.099 kb on + strand, within GFF2924 at 645.099 kb on + strand, within GFF2924 at 645.099 kb on + strand, within GFF2924 at 645.100 kb on - strand, within GFF2924 at 645.100 kb on - strand, within GFF2924 at 645.306 kb on - strand at 645.407 kb on + strand, within GFF2925 at 645.407 kb on + strand, within GFF2925 at 645.408 kb on - strand, within GFF2925 at 645.408 kb on - strand, within GFF2925 at 645.527 kb on + strand, within GFF2925 at 645.527 kb on + strand, within GFF2925 at 645.528 kb on - strand, within GFF2925 at 645.661 kb on + strand at 645.662 kb on - strand at 645.662 kb on - strand at 645.730 kb on + strand at 645.730 kb on + strand at 645.731 kb on - strand at 645.949 kb on + strand, within GFF2926 at 645.950 kb on - strand, within GFF2926 at 645.953 kb on - strand, within GFF2926 at 645.953 kb on - strand, within GFF2926 at 645.953 kb on - strand, within GFF2926 at 645.994 kb on + strand, within GFF2926 at 645.994 kb on + strand, within GFF2926 at 645.994 kb on + strand, within GFF2926 at 646.060 kb on + strand, within GFF2926 at 646.061 kb on - strand, within GFF2926 at 646.216 kb on - strand, within GFF2926 at 646.216 kb on - strand, within GFF2926 at 646.319 kb on - strand, within GFF2926 at 646.321 kb on + strand, within GFF2926 at 646.321 kb on + strand, within GFF2926 at 646.321 kb on + strand, within GFF2926 at 646.322 kb on - strand, within GFF2926 at 646.516 kb on + strand, within GFF2926 at 646.517 kb on - strand, within GFF2926 at 646.517 kb on - strand, within GFF2926 at 646.517 kb on - strand, within GFF2926 at 646.517 kb on - strand, within GFF2926 at 646.517 kb on - strand, within GFF2926
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 644,346 + GFF2924 0.26 -0.1 644,346 + GFF2924 0.26 -0.2 644,347 - GFF2924 0.26 -0.7 644,347 - GFF2924 0.26 -0.6 644,347 - GFF2924 0.26 -0.0 644,347 - GFF2924 0.26 -0.2 644,427 + GFF2924 0.32 +0.3 644,744 + GFF2924 0.58 -0.6 644,744 + GFF2924 0.58 +0.2 644,744 + GFF2924 0.58 -0.7 644,745 - GFF2924 0.58 -0.1 644,745 - GFF2924 0.58 -0.4 644,745 - GFF2924 0.58 +0.7 644,745 - GFF2924 0.58 -0.0 644,871 + GFF2924 0.68 +0.6 644,872 - GFF2924 0.68 +0.1 644,925 + GFF2924 0.72 -0.5 644,925 + GFF2924 0.72 +0.6 644,925 + GFF2924 0.72 +1.0 644,925 + GFF2924 0.72 +0.9 644,926 - GFF2924 0.72 -0.2 644,926 - GFF2924 0.72 -0.0 644,934 + GFF2924 0.73 +2.2 644,935 - GFF2924 0.73 -0.7 645,099 + GFF2924 0.86 -0.5 645,099 + GFF2924 0.86 -1.2 645,099 + GFF2924 0.86 +0.3 645,099 + GFF2924 0.86 -0.0 645,100 - GFF2924 0.86 -0.1 645,100 - GFF2924 0.86 -0.2 645,306 - -0.7 645,407 + GFF2925 0.43 +1.9 645,407 + GFF2925 0.43 -0.1 645,408 - GFF2925 0.43 -0.9 645,408 - GFF2925 0.43 -0.5 645,527 + GFF2925 0.84 -1.9 645,527 + GFF2925 0.84 -1.5 645,528 - GFF2925 0.85 -0.2 645,661 + -1.0 645,662 - -0.6 645,662 - -0.7 645,730 + -0.1 645,730 + -0.8 645,731 - -0.7 645,949 + GFF2926 0.13 -0.6 645,950 - GFF2926 0.13 +0.2 645,953 - GFF2926 0.13 +0.7 645,953 - GFF2926 0.13 +0.2 645,953 - GFF2926 0.13 -0.3 645,994 + GFF2926 0.14 -0.3 645,994 + GFF2926 0.14 -0.1 645,994 + GFF2926 0.14 -0.0 646,060 + GFF2926 0.16 +0.1 646,061 - GFF2926 0.16 +0.1 646,216 - GFF2926 0.21 -0.0 646,216 - GFF2926 0.21 -0.7 646,319 - GFF2926 0.25 +0.1 646,321 + GFF2926 0.25 +1.3 646,321 + GFF2926 0.25 -0.4 646,321 + GFF2926 0.25 +0.8 646,322 - GFF2926 0.25 -0.5 646,516 + GFF2926 0.31 +0.1 646,517 - GFF2926 0.31 +0.3 646,517 - GFF2926 0.31 -0.6 646,517 - GFF2926 0.31 -0.5 646,517 - GFF2926 0.31 +0.4 646,517 - GFF2926 0.31 +0.9
Or see this region's nucleotide sequence