Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2865 and GFF2866 are separated by 589 nucleotides GFF2866 and GFF2867 are separated by 91 nucleotides
GFF2865 - 3-hydroxybenzoate transporter MhbT, at 580,298 to 581,650
GFF2865
GFF2866 - Betaine aldehyde dehydrogenase, at 582,240 to 583,727
GFF2866
GFF2867 - 4-hydroxybenzoate transporter PcaK, at 583,819 to 585,201
GFF2867
Position (kb) 582
583
584 Strain fitness (log2 ratio) -1
0
1
2 at 581.449 kb on + strand, within GFF2865 at 581.842 kb on + strand at 581.885 kb on - strand at 581.912 kb on + strand at 581.920 kb on - strand at 581.921 kb on + strand at 582.198 kb on - strand at 582.198 kb on - strand at 582.241 kb on + strand at 582.322 kb on + strand at 582.322 kb on + strand at 582.322 kb on + strand at 582.323 kb on - strand at 582.323 kb on - strand at 582.323 kb on - strand at 582.323 kb on - strand at 582.415 kb on + strand, within GFF2866 at 582.415 kb on + strand, within GFF2866 at 582.416 kb on - strand, within GFF2866 at 582.416 kb on - strand, within GFF2866 at 582.416 kb on - strand, within GFF2866 at 582.487 kb on + strand, within GFF2866 at 582.487 kb on + strand, within GFF2866 at 582.487 kb on + strand, within GFF2866 at 582.487 kb on + strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.488 kb on - strand, within GFF2866 at 582.646 kb on + strand, within GFF2866 at 582.647 kb on - strand, within GFF2866 at 582.647 kb on - strand, within GFF2866 at 582.726 kb on - strand, within GFF2866 at 582.726 kb on - strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.727 kb on + strand, within GFF2866 at 582.728 kb on - strand, within GFF2866 at 582.728 kb on - strand, within GFF2866 at 582.728 kb on - strand, within GFF2866 at 582.728 kb on - strand, within GFF2866 at 582.728 kb on - strand, within GFF2866 at 582.905 kb on + strand, within GFF2866 at 582.905 kb on + strand, within GFF2866 at 582.906 kb on - strand, within GFF2866 at 582.906 kb on - strand, within GFF2866 at 583.262 kb on + strand, within GFF2866 at 583.310 kb on - strand, within GFF2866 at 583.333 kb on + strand, within GFF2866 at 584.033 kb on + strand, within GFF2867 at 584.033 kb on + strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.049 kb on - strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.055 kb on - strand, within GFF2867 at 584.055 kb on - strand, within GFF2867 at 584.085 kb on - strand, within GFF2867 at 584.087 kb on + strand, within GFF2867 at 584.087 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.399 kb on + strand, within GFF2867 at 584.399 kb on + strand, within GFF2867 at 584.400 kb on - strand, within GFF2867 at 584.711 kb on + strand, within GFF2867 at 584.711 kb on + strand, within GFF2867
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 581,449 + GFF2865 0.85 +0.1 581,842 + +0.5 581,885 - +0.9 581,912 + -0.0 581,920 - +0.5 581,921 + +0.3 582,198 - -0.4 582,198 - +0.0 582,241 + +0.1 582,322 + +0.0 582,322 + -0.2 582,322 + -0.5 582,323 - -0.2 582,323 - -0.4 582,323 - +0.5 582,323 - +1.7 582,415 + GFF2866 0.12 +1.4 582,415 + GFF2866 0.12 -1.4 582,416 - GFF2866 0.12 +0.1 582,416 - GFF2866 0.12 +0.2 582,416 - GFF2866 0.12 +0.1 582,487 + GFF2866 0.17 +1.4 582,487 + GFF2866 0.17 -0.1 582,487 + GFF2866 0.17 +0.6 582,487 + GFF2866 0.17 -0.0 582,488 - GFF2866 0.17 +1.0 582,488 - GFF2866 0.17 +0.6 582,488 - GFF2866 0.17 +0.2 582,488 - GFF2866 0.17 -0.1 582,488 - GFF2866 0.17 +0.4 582,488 - GFF2866 0.17 +1.1 582,488 - GFF2866 0.17 -0.5 582,646 + GFF2866 0.27 -0.2 582,647 - GFF2866 0.27 +0.1 582,647 - GFF2866 0.27 -0.6 582,726 - GFF2866 0.33 +1.8 582,726 - GFF2866 0.33 -0.3 582,727 + GFF2866 0.33 -0.4 582,727 + GFF2866 0.33 +0.6 582,727 + GFF2866 0.33 -0.3 582,727 + GFF2866 0.33 +0.1 582,727 + GFF2866 0.33 -0.3 582,727 + GFF2866 0.33 -0.0 582,728 - GFF2866 0.33 -0.4 582,728 - GFF2866 0.33 +0.1 582,728 - GFF2866 0.33 +0.1 582,728 - GFF2866 0.33 +1.1 582,728 - GFF2866 0.33 -0.8 582,905 + GFF2866 0.45 -0.1 582,905 + GFF2866 0.45 -0.0 582,906 - GFF2866 0.45 +0.3 582,906 - GFF2866 0.45 -0.9 583,262 + GFF2866 0.69 +0.9 583,310 - GFF2866 0.72 -1.3 583,333 + GFF2866 0.73 -0.7 584,033 + GFF2867 0.15 -0.4 584,033 + GFF2867 0.15 +0.0 584,034 - GFF2867 0.16 -0.4 584,034 - GFF2867 0.16 -0.0 584,034 - GFF2867 0.16 -0.2 584,049 - GFF2867 0.17 +0.1 584,054 + GFF2867 0.17 -0.2 584,054 + GFF2867 0.17 -0.3 584,054 + GFF2867 0.17 +0.2 584,054 + GFF2867 0.17 -0.4 584,054 + GFF2867 0.17 -0.4 584,055 - GFF2867 0.17 +0.7 584,055 - GFF2867 0.17 +0.1 584,085 - GFF2867 0.19 +0.2 584,087 + GFF2867 0.19 -0.6 584,087 + GFF2867 0.19 -0.1 584,342 + GFF2867 0.38 +0.1 584,342 + GFF2867 0.38 +0.3 584,342 + GFF2867 0.38 -0.7 584,342 + GFF2867 0.38 +0.0 584,399 + GFF2867 0.42 +1.1 584,399 + GFF2867 0.42 -0.9 584,400 - GFF2867 0.42 -1.3 584,711 + GFF2867 0.64 +0.9 584,711 + GFF2867 0.64 -0.3
Or see this region's nucleotide sequence