Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2844 and GFF2845 are separated by 11 nucleotides GFF2845 and GFF2846 are separated by 104 nucleotides GFF2846 and GFF2847 are separated by 155 nucleotides GFF2847 and GFF2848 are separated by 89 nucleotides
GFF2844 - Solute-binding protein, at 555,747 to 556,745
GFF2844
GFF2845 - putative enoyl-CoA hydratase echA8, at 556,757 to 557,530
GFF2845
GFF2846 - HTH-type transcriptional regulator PerR, at 557,635 to 558,522
GFF2846
GFF2847 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 558,678 to 559,427
GFF2847
GFF2848 - Apulose-4-phosphate transketolase subunit A, at 559,517 to 560,356
GFF2848
Position (kb) 557
558
559 Strain fitness (log2 ratio) -2
-1
0
1
2 at 556.683 kb on + strand at 556.763 kb on + strand at 556.763 kb on + strand at 556.764 kb on - strand at 556.764 kb on - strand at 556.849 kb on + strand, within GFF2845 at 557.067 kb on - strand, within GFF2845 at 557.067 kb on - strand, within GFF2845 at 557.350 kb on + strand, within GFF2845 at 557.350 kb on + strand, within GFF2845 at 557.351 kb on - strand, within GFF2845 at 557.732 kb on + strand, within GFF2846 at 557.732 kb on + strand, within GFF2846 at 557.732 kb on + strand, within GFF2846 at 557.744 kb on + strand, within GFF2846 at 557.744 kb on + strand, within GFF2846 at 557.744 kb on + strand, within GFF2846 at 557.744 kb on + strand, within GFF2846 at 557.744 kb on + strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 557.745 kb on - strand, within GFF2846 at 558.092 kb on + strand, within GFF2846 at 558.093 kb on - strand, within GFF2846 at 558.093 kb on - strand, within GFF2846 at 559.140 kb on + strand, within GFF2847 at 559.140 kb on + strand, within GFF2847 at 559.140 kb on + strand, within GFF2847 at 559.141 kb on - strand, within GFF2847 at 559.377 kb on + strand at 559.377 kb on + strand at 559.378 kb on - strand at 559.378 kb on - strand at 559.378 kb on - strand at 559.425 kb on + strand at 559.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 556,683 + -0.7 556,763 + -0.8 556,763 + +0.3 556,764 - +0.3 556,764 - -0.4 556,849 + GFF2845 0.12 +0.1 557,067 - GFF2845 0.40 -0.5 557,067 - GFF2845 0.40 +0.3 557,350 + GFF2845 0.77 +0.1 557,350 + GFF2845 0.77 +0.2 557,351 - GFF2845 0.77 +0.7 557,732 + GFF2846 0.11 +0.4 557,732 + GFF2846 0.11 -0.3 557,732 + GFF2846 0.11 -0.8 557,744 + GFF2846 0.12 +0.7 557,744 + GFF2846 0.12 +0.4 557,744 + GFF2846 0.12 -1.2 557,744 + GFF2846 0.12 -1.0 557,744 + GFF2846 0.12 -0.6 557,745 - GFF2846 0.12 -0.3 557,745 - GFF2846 0.12 -0.0 557,745 - GFF2846 0.12 +1.8 557,745 - GFF2846 0.12 -0.3 557,745 - GFF2846 0.12 -1.7 557,745 - GFF2846 0.12 -0.2 557,745 - GFF2846 0.12 -0.2 557,745 - GFF2846 0.12 +1.1 557,745 - GFF2846 0.12 -0.6 558,092 + GFF2846 0.51 -0.1 558,093 - GFF2846 0.52 -0.6 558,093 - GFF2846 0.52 +0.7 559,140 + GFF2847 0.62 +0.1 559,140 + GFF2847 0.62 +0.2 559,140 + GFF2847 0.62 -0.4 559,141 - GFF2847 0.62 -0.9 559,377 + +0.3 559,377 + -2.4 559,378 - -0.3 559,378 - -0.6 559,378 - +0.1 559,425 + +0.1 559,426 - +0.9
Or see this region's nucleotide sequence