Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2769 and GFF2770 are separated by 22 nucleotides GFF2770 and GFF2771 overlap by 4 nucleotides GFF2771 and GFF2772 overlap by 4 nucleotides
GFF2769 - Fumarate reductase flavoprotein subunit, at 471,154 to 472,596
GFF2769
GFF2770 - hypothetical protein, at 472,619 to 472,921
GFF2770
GFF2771 - hypothetical protein, at 472,918 to 474,348
GFF2771
GFF2772 - HTH-type transcriptional regulator HdfR, at 474,345 to 475,232
GFF2772
Position (kb) 472
473
474
475 Strain fitness (log2 ratio) -2
-1
0
1 at 471.928 kb on + strand, within GFF2769 at 472.054 kb on - strand, within GFF2769 at 472.054 kb on - strand, within GFF2769 at 472.061 kb on - strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.480 kb on + strand at 472.481 kb on - strand at 472.507 kb on + strand at 472.507 kb on + strand at 472.507 kb on + strand at 472.507 kb on + strand at 472.507 kb on + strand at 472.508 kb on - strand at 472.508 kb on - strand at 472.510 kb on + strand at 472.511 kb on - strand at 472.519 kb on + strand at 472.521 kb on + strand at 472.522 kb on - strand at 472.522 kb on - strand at 472.522 kb on - strand at 472.522 kb on - strand at 472.647 kb on + strand at 472.648 kb on - strand at 472.802 kb on + strand, within GFF2770 at 472.802 kb on + strand, within GFF2770 at 472.803 kb on - strand, within GFF2770 at 472.827 kb on + strand, within GFF2770 at 472.827 kb on + strand, within GFF2770 at 472.827 kb on + strand, within GFF2770 at 472.827 kb on + strand, within GFF2770 at 472.827 kb on + strand, within GFF2770 at 472.828 kb on - strand, within GFF2770 at 472.828 kb on - strand, within GFF2770 at 472.911 kb on + strand at 472.917 kb on + strand at 472.918 kb on - strand at 472.918 kb on - strand at 473.006 kb on - strand at 473.006 kb on - strand at 473.145 kb on - strand, within GFF2771 at 473.299 kb on + strand, within GFF2771 at 473.300 kb on - strand, within GFF2771 at 473.300 kb on - strand, within GFF2771 at 473.300 kb on - strand, within GFF2771 at 473.370 kb on + strand, within GFF2771 at 473.370 kb on + strand, within GFF2771 at 473.371 kb on - strand, within GFF2771 at 473.631 kb on - strand, within GFF2771 at 473.631 kb on - strand, within GFF2771 at 473.710 kb on + strand, within GFF2771 at 473.710 kb on + strand, within GFF2771 at 473.711 kb on - strand, within GFF2771 at 473.711 kb on - strand, within GFF2771 at 473.711 kb on - strand, within GFF2771 at 473.996 kb on - strand, within GFF2771 at 473.996 kb on - strand, within GFF2771 at 473.996 kb on - strand, within GFF2771 at 473.996 kb on - strand, within GFF2771 at 474.017 kb on - strand, within GFF2771 at 474.084 kb on - strand, within GFF2771 at 474.084 kb on - strand, within GFF2771 at 474.084 kb on - strand, within GFF2771 at 474.148 kb on + strand, within GFF2771 at 474.148 kb on + strand, within GFF2771 at 474.148 kb on + strand, within GFF2771 at 474.149 kb on - strand, within GFF2771 at 474.149 kb on - strand, within GFF2771 at 474.210 kb on + strand at 474.252 kb on + strand at 474.252 kb on + strand at 474.253 kb on - strand at 474.253 kb on - strand at 474.253 kb on - strand at 474.253 kb on - strand at 474.257 kb on - strand at 474.314 kb on + strand at 474.314 kb on + strand at 474.314 kb on + strand at 474.315 kb on - strand at 474.333 kb on - strand at 474.347 kb on - strand at 474.452 kb on - strand, within GFF2772 at 474.452 kb on - strand, within GFF2772 at 474.452 kb on - strand, within GFF2772 at 474.452 kb on - strand, within GFF2772 at 474.452 kb on - strand, within GFF2772 at 474.517 kb on + strand, within GFF2772 at 474.517 kb on + strand, within GFF2772 at 474.518 kb on - strand, within GFF2772 at 474.518 kb on - strand, within GFF2772 at 474.661 kb on + strand, within GFF2772 at 474.661 kb on + strand, within GFF2772 at 474.661 kb on + strand, within GFF2772 at 474.662 kb on - strand, within GFF2772 at 474.662 kb on - strand, within GFF2772 at 474.724 kb on + strand, within GFF2772 at 474.724 kb on + strand, within GFF2772 at 474.725 kb on - strand, within GFF2772 at 474.725 kb on - strand, within GFF2772 at 474.725 kb on - strand, within GFF2772 at 474.739 kb on + strand, within GFF2772 at 474.739 kb on + strand, within GFF2772 at 474.739 kb on + strand, within GFF2772 at 474.740 kb on - strand, within GFF2772 at 474.755 kb on - strand, within GFF2772 at 474.755 kb on - strand, within GFF2772 at 474.760 kb on + strand, within GFF2772 at 474.778 kb on + strand, within GFF2772 at 474.778 kb on + strand, within GFF2772 at 474.779 kb on - strand, within GFF2772 at 474.932 kb on - strand, within GFF2772 at 475.255 kb on + strand at 475.256 kb on - strand at 475.266 kb on + strand at 475.267 kb on - strand at 475.309 kb on + strand at 475.309 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 471,928 + GFF2769 0.54 +0.5 472,054 - GFF2769 0.62 -0.8 472,054 - GFF2769 0.62 +0.2 472,061 - GFF2769 0.63 +0.8 472,108 + GFF2769 0.66 -0.3 472,108 + GFF2769 0.66 -0.4 472,108 + GFF2769 0.66 +0.4 472,109 - GFF2769 0.66 +0.9 472,109 - GFF2769 0.66 +0.1 472,109 - GFF2769 0.66 +0.2 472,109 - GFF2769 0.66 -0.8 472,480 + +0.0 472,481 - +0.0 472,507 + +0.7 472,507 + -0.8 472,507 + +0.9 472,507 + +0.3 472,507 + +0.8 472,508 - -0.8 472,508 - +1.0 472,510 + -0.8 472,511 - -0.6 472,519 + -1.3 472,521 + -2.0 472,522 - -0.3 472,522 - -0.5 472,522 - +0.0 472,522 - +0.2 472,647 + +0.1 472,648 - +0.0 472,802 + GFF2770 0.60 +0.1 472,802 + GFF2770 0.60 -0.1 472,803 - GFF2770 0.61 -0.5 472,827 + GFF2770 0.69 +0.2 472,827 + GFF2770 0.69 +0.3 472,827 + GFF2770 0.69 -0.3 472,827 + GFF2770 0.69 +0.8 472,827 + GFF2770 0.69 +0.6 472,828 - GFF2770 0.69 -0.8 472,828 - GFF2770 0.69 -0.8 472,911 + -0.2 472,917 + -0.1 472,918 - +0.6 472,918 - -0.9 473,006 - +1.2 473,006 - -0.3 473,145 - GFF2771 0.16 -0.3 473,299 + GFF2771 0.27 +0.2 473,300 - GFF2771 0.27 +0.2 473,300 - GFF2771 0.27 -2.5 473,300 - GFF2771 0.27 +0.2 473,370 + GFF2771 0.32 -0.3 473,370 + GFF2771 0.32 -0.2 473,371 - GFF2771 0.32 +0.2 473,631 - GFF2771 0.50 +0.2 473,631 - GFF2771 0.50 -0.6 473,710 + GFF2771 0.55 -0.2 473,710 + GFF2771 0.55 -0.4 473,711 - GFF2771 0.55 +0.8 473,711 - GFF2771 0.55 -1.0 473,711 - GFF2771 0.55 +1.5 473,996 - GFF2771 0.75 +0.2 473,996 - GFF2771 0.75 -1.2 473,996 - GFF2771 0.75 -1.0 473,996 - GFF2771 0.75 -0.4 474,017 - GFF2771 0.77 +0.8 474,084 - GFF2771 0.81 +0.1 474,084 - GFF2771 0.81 +0.2 474,084 - GFF2771 0.81 +0.0 474,148 + GFF2771 0.86 -0.6 474,148 + GFF2771 0.86 +0.2 474,148 + GFF2771 0.86 +0.7 474,149 - GFF2771 0.86 -0.5 474,149 - GFF2771 0.86 +0.4 474,210 + +0.6 474,252 + -0.3 474,252 + -1.0 474,253 - -0.3 474,253 - -0.1 474,253 - -0.6 474,253 - +0.5 474,257 - +1.1 474,314 + -1.0 474,314 + -0.1 474,314 + +1.2 474,315 - -0.5 474,333 - +0.5 474,347 - -0.8 474,452 - GFF2772 0.12 -1.2 474,452 - GFF2772 0.12 -0.4 474,452 - GFF2772 0.12 -0.1 474,452 - GFF2772 0.12 +0.2 474,452 - GFF2772 0.12 -0.3 474,517 + GFF2772 0.19 -0.6 474,517 + GFF2772 0.19 +0.0 474,518 - GFF2772 0.19 +0.0 474,518 - GFF2772 0.19 -0.3 474,661 + GFF2772 0.36 -0.6 474,661 + GFF2772 0.36 -0.3 474,661 + GFF2772 0.36 -1.1 474,662 - GFF2772 0.36 -0.4 474,662 - GFF2772 0.36 -0.2 474,724 + GFF2772 0.43 -0.3 474,724 + GFF2772 0.43 +0.4 474,725 - GFF2772 0.43 +0.2 474,725 - GFF2772 0.43 -1.4 474,725 - GFF2772 0.43 +0.5 474,739 + GFF2772 0.44 +0.0 474,739 + GFF2772 0.44 -0.6 474,739 + GFF2772 0.44 -0.2 474,740 - GFF2772 0.44 +0.2 474,755 - GFF2772 0.46 -0.2 474,755 - GFF2772 0.46 +0.2 474,760 + GFF2772 0.47 +0.4 474,778 + GFF2772 0.49 +0.4 474,778 + GFF2772 0.49 +0.9 474,779 - GFF2772 0.49 +0.9 474,932 - GFF2772 0.66 -1.2 475,255 + +0.2 475,256 - -0.1 475,266 + +0.1 475,267 - -0.8 475,309 + +0.2 475,309 + -0.4
Or see this region's nucleotide sequence