Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2700 and GFF2701 overlap by 8 nucleotides GFF2701 and GFF2702 are separated by 89 nucleotides
GFF2700 - hypothetical protein, at 384,983 to 388,258
GFF2700
GFF2701 - hypothetical protein, at 388,251 to 389,051
GFF2701
GFF2702 - hypothetical protein, at 389,141 to 391,699
GFF2702
Position (kb) 388
389
390 Strain fitness (log2 ratio) -2
-1
0
1 at 387.327 kb on + strand, within GFF2700 at 387.327 kb on + strand, within GFF2700 at 387.328 kb on - strand, within GFF2700 at 387.328 kb on - strand, within GFF2700 at 387.328 kb on - strand, within GFF2700 at 387.328 kb on - strand, within GFF2700 at 387.362 kb on + strand, within GFF2700 at 387.362 kb on + strand, within GFF2700 at 387.362 kb on + strand, within GFF2700 at 387.362 kb on + strand, within GFF2700 at 387.363 kb on - strand, within GFF2700 at 387.363 kb on - strand, within GFF2700 at 387.363 kb on - strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.366 kb on + strand, within GFF2700 at 387.367 kb on - strand, within GFF2700 at 387.367 kb on - strand, within GFF2700 at 387.393 kb on - strand, within GFF2700 at 387.448 kb on + strand, within GFF2700 at 387.448 kb on + strand, within GFF2700 at 387.448 kb on + strand, within GFF2700 at 387.448 kb on + strand, within GFF2700 at 387.449 kb on - strand, within GFF2700 at 387.449 kb on - strand, within GFF2700 at 387.495 kb on - strand, within GFF2700 at 387.495 kb on - strand, within GFF2700 at 387.495 kb on - strand, within GFF2700 at 387.495 kb on - strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.522 kb on + strand, within GFF2700 at 387.523 kb on - strand, within GFF2700 at 387.523 kb on - strand, within GFF2700 at 387.523 kb on - strand, within GFF2700 at 387.523 kb on - strand, within GFF2700 at 387.523 kb on - strand, within GFF2700 at 387.554 kb on + strand, within GFF2700 at 387.631 kb on + strand, within GFF2700 at 387.643 kb on + strand, within GFF2700 at 387.644 kb on - strand, within GFF2700 at 387.644 kb on - strand, within GFF2700 at 387.644 kb on - strand, within GFF2700 at 387.644 kb on - strand, within GFF2700 at 387.644 kb on - strand, within GFF2700 at 387.680 kb on + strand, within GFF2700 at 387.690 kb on + strand, within GFF2700 at 387.690 kb on + strand, within GFF2700 at 387.690 kb on + strand, within GFF2700 at 387.691 kb on - strand, within GFF2700 at 387.691 kb on - strand, within GFF2700 at 387.691 kb on - strand, within GFF2700 at 387.691 kb on - strand, within GFF2700 at 387.691 kb on - strand, within GFF2700 at 387.692 kb on + strand, within GFF2700 at 387.692 kb on + strand, within GFF2700 at 387.693 kb on - strand, within GFF2700 at 387.693 kb on - strand, within GFF2700 at 387.814 kb on + strand, within GFF2700 at 387.815 kb on - strand, within GFF2700 at 387.815 kb on - strand, within GFF2700 at 387.815 kb on - strand, within GFF2700 at 387.939 kb on + strand at 387.939 kb on + strand at 387.939 kb on + strand at 387.939 kb on + strand at 387.939 kb on + strand at 387.940 kb on - strand at 387.940 kb on - strand at 387.940 kb on - strand at 387.940 kb on - strand at 388.025 kb on - strand at 388.025 kb on - strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.164 kb on + strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.165 kb on - strand at 388.273 kb on - strand at 388.372 kb on - strand, within GFF2701 at 388.381 kb on + strand, within GFF2701 at 388.381 kb on + strand, within GFF2701 at 388.381 kb on + strand, within GFF2701 at 388.382 kb on - strand, within GFF2701 at 388.382 kb on - strand, within GFF2701 at 388.382 kb on - strand, within GFF2701 at 388.382 kb on - strand, within GFF2701 at 388.436 kb on + strand, within GFF2701 at 388.436 kb on + strand, within GFF2701 at 388.436 kb on + strand, within GFF2701 at 388.437 kb on - strand, within GFF2701 at 388.437 kb on - strand, within GFF2701 at 388.437 kb on - strand, within GFF2701 at 388.451 kb on - strand, within GFF2701 at 388.475 kb on + strand, within GFF2701 at 388.475 kb on + strand, within GFF2701 at 388.475 kb on + strand, within GFF2701 at 388.476 kb on - strand, within GFF2701 at 388.477 kb on - strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.499 kb on + strand, within GFF2701 at 388.500 kb on - strand, within GFF2701 at 388.500 kb on - strand, within GFF2701 at 388.500 kb on - strand, within GFF2701 at 388.592 kb on + strand, within GFF2701 at 388.592 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.718 kb on + strand, within GFF2701 at 388.719 kb on - strand, within GFF2701 at 388.719 kb on - strand, within GFF2701 at 388.719 kb on - strand, within GFF2701 at 388.719 kb on - strand, within GFF2701 at 388.719 kb on - strand, within GFF2701 at 388.741 kb on - strand, within GFF2701 at 388.741 kb on - strand, within GFF2701 at 389.036 kb on + strand at 389.043 kb on - strand at 389.043 kb on - strand at 389.043 kb on - strand at 389.045 kb on + strand at 389.046 kb on - strand at 389.051 kb on + strand at 389.051 kb on + strand at 389.052 kb on - strand at 389.052 kb on - strand at 389.052 kb on - strand at 389.071 kb on + strand at 389.072 kb on - strand at 389.072 kb on - strand at 389.072 kb on - strand at 389.108 kb on + strand at 389.108 kb on + strand at 389.109 kb on - strand at 389.133 kb on + strand at 389.134 kb on - strand at 389.170 kb on + strand at 389.234 kb on - strand at 389.235 kb on + strand at 389.274 kb on + strand at 389.274 kb on + strand at 389.275 kb on - strand at 389.275 kb on - strand at 389.307 kb on + strand at 389.308 kb on - strand at 389.308 kb on - strand at 389.308 kb on - strand at 389.308 kb on - strand at 389.308 kb on - strand at 389.319 kb on + strand at 389.319 kb on + strand at 389.319 kb on + strand at 389.320 kb on - strand at 389.443 kb on + strand, within GFF2702 at 389.443 kb on + strand, within GFF2702 at 389.443 kb on + strand, within GFF2702 at 389.443 kb on + strand, within GFF2702 at 389.444 kb on - strand, within GFF2702 at 389.444 kb on - strand, within GFF2702 at 389.445 kb on + strand, within GFF2702 at 389.445 kb on + strand, within GFF2702 at 389.445 kb on + strand, within GFF2702 at 389.446 kb on - strand, within GFF2702 at 389.446 kb on - strand, within GFF2702 at 389.446 kb on - strand, within GFF2702 at 389.446 kb on - strand, within GFF2702 at 389.488 kb on + strand, within GFF2702 at 389.488 kb on + strand, within GFF2702 at 389.488 kb on + strand, within GFF2702 at 389.506 kb on - strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.661 kb on + strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.662 kb on - strand, within GFF2702 at 389.882 kb on + strand, within GFF2702 at 389.882 kb on + strand, within GFF2702 at 389.883 kb on - strand, within GFF2702 at 389.883 kb on - strand, within GFF2702 at 389.893 kb on - strand, within GFF2702 at 389.893 kb on - strand, within GFF2702 at 389.893 kb on - strand, within GFF2702 at 389.904 kb on + strand, within GFF2702 at 389.905 kb on - strand, within GFF2702 at 389.906 kb on - strand, within GFF2702 at 389.928 kb on + strand, within GFF2702 at 390.013 kb on - strand, within GFF2702 at 390.013 kb on - strand, within GFF2702 at 390.013 kb on - strand, within GFF2702 at 390.013 kb on - strand, within GFF2702
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 387,327 + GFF2700 0.72 +0.6 387,327 + GFF2700 0.72 -0.8 387,328 - GFF2700 0.72 +0.4 387,328 - GFF2700 0.72 +0.6 387,328 - GFF2700 0.72 -0.1 387,328 - GFF2700 0.72 +0.9 387,362 + GFF2700 0.73 +0.2 387,362 + GFF2700 0.73 +0.4 387,362 + GFF2700 0.73 -0.4 387,362 + GFF2700 0.73 -0.3 387,363 - GFF2700 0.73 -2.4 387,363 - GFF2700 0.73 +0.5 387,363 - GFF2700 0.73 -0.2 387,366 + GFF2700 0.73 -0.2 387,366 + GFF2700 0.73 -0.3 387,366 + GFF2700 0.73 +0.7 387,366 + GFF2700 0.73 -0.5 387,366 + GFF2700 0.73 -1.8 387,366 + GFF2700 0.73 +0.7 387,366 + GFF2700 0.73 -0.6 387,366 + GFF2700 0.73 +1.2 387,367 - GFF2700 0.73 -0.4 387,367 - GFF2700 0.73 -0.1 387,393 - GFF2700 0.74 -0.5 387,448 + GFF2700 0.75 -0.8 387,448 + GFF2700 0.75 -0.3 387,448 + GFF2700 0.75 +0.6 387,448 + GFF2700 0.75 -0.4 387,449 - GFF2700 0.75 +0.4 387,449 - GFF2700 0.75 -1.6 387,495 - GFF2700 0.77 -0.2 387,495 - GFF2700 0.77 +0.6 387,495 - GFF2700 0.77 -0.1 387,495 - GFF2700 0.77 +0.2 387,522 + GFF2700 0.78 -0.8 387,522 + GFF2700 0.78 +0.3 387,522 + GFF2700 0.78 -0.4 387,522 + GFF2700 0.78 -0.1 387,522 + GFF2700 0.78 +1.0 387,522 + GFF2700 0.78 +0.4 387,522 + GFF2700 0.78 +0.4 387,522 + GFF2700 0.78 +0.5 387,522 + GFF2700 0.78 -0.7 387,523 - GFF2700 0.78 -1.0 387,523 - GFF2700 0.78 +0.2 387,523 - GFF2700 0.78 -0.3 387,523 - GFF2700 0.78 -0.3 387,523 - GFF2700 0.78 +0.3 387,554 + GFF2700 0.78 -0.5 387,631 + GFF2700 0.81 -0.3 387,643 + GFF2700 0.81 -0.9 387,644 - GFF2700 0.81 +0.1 387,644 - GFF2700 0.81 -0.4 387,644 - GFF2700 0.81 -0.1 387,644 - GFF2700 0.81 -1.5 387,644 - GFF2700 0.81 +1.0 387,680 + GFF2700 0.82 +1.2 387,690 + GFF2700 0.83 -0.8 387,690 + GFF2700 0.83 +0.2 387,690 + GFF2700 0.83 -0.3 387,691 - GFF2700 0.83 +1.2 387,691 - GFF2700 0.83 -0.5 387,691 - GFF2700 0.83 +0.2 387,691 - GFF2700 0.83 +0.8 387,691 - GFF2700 0.83 +0.3 387,692 + GFF2700 0.83 -0.6 387,692 + GFF2700 0.83 -0.3 387,693 - GFF2700 0.83 -0.3 387,693 - GFF2700 0.83 -0.4 387,814 + GFF2700 0.86 +1.7 387,815 - GFF2700 0.86 -0.0 387,815 - GFF2700 0.86 +0.2 387,815 - GFF2700 0.86 +1.0 387,939 + +0.1 387,939 + -0.2 387,939 + -0.5 387,939 + -0.5 387,939 + +0.3 387,940 - -0.6 387,940 - +0.3 387,940 - +0.6 387,940 - +0.8 388,025 - -0.3 388,025 - -0.2 388,164 + +0.7 388,164 + +1.0 388,164 + +0.3 388,164 + -0.9 388,164 + +0.1 388,164 + +0.4 388,164 + +0.6 388,165 - -1.6 388,165 - -1.3 388,165 - +0.3 388,165 - -0.1 388,165 - -0.2 388,165 - -0.6 388,165 - +0.3 388,273 - -0.6 388,372 - GFF2701 0.15 -1.0 388,381 + GFF2701 0.16 -0.3 388,381 + GFF2701 0.16 -0.5 388,381 + GFF2701 0.16 -1.4 388,382 - GFF2701 0.16 -0.1 388,382 - GFF2701 0.16 -0.7 388,382 - GFF2701 0.16 -0.6 388,382 - GFF2701 0.16 -0.3 388,436 + GFF2701 0.23 -0.5 388,436 + GFF2701 0.23 +1.3 388,436 + GFF2701 0.23 -0.6 388,437 - GFF2701 0.23 +0.4 388,437 - GFF2701 0.23 +0.8 388,437 - GFF2701 0.23 +0.6 388,451 - GFF2701 0.25 -0.8 388,475 + GFF2701 0.28 -1.2 388,475 + GFF2701 0.28 +0.6 388,475 + GFF2701 0.28 -0.1 388,476 - GFF2701 0.28 +0.2 388,477 - GFF2701 0.28 -0.4 388,499 + GFF2701 0.31 -0.7 388,499 + GFF2701 0.31 -0.4 388,499 + GFF2701 0.31 -0.3 388,499 + GFF2701 0.31 -0.6 388,499 + GFF2701 0.31 -0.0 388,499 + GFF2701 0.31 -1.0 388,499 + GFF2701 0.31 -1.2 388,499 + GFF2701 0.31 -0.0 388,500 - GFF2701 0.31 -0.6 388,500 - GFF2701 0.31 -0.5 388,500 - GFF2701 0.31 +0.4 388,592 + GFF2701 0.43 +0.3 388,592 + GFF2701 0.43 +0.0 388,718 + GFF2701 0.58 -0.6 388,718 + GFF2701 0.58 +0.0 388,718 + GFF2701 0.58 -0.4 388,718 + GFF2701 0.58 -0.5 388,718 + GFF2701 0.58 -1.5 388,718 + GFF2701 0.58 +0.1 388,719 - GFF2701 0.58 -0.3 388,719 - GFF2701 0.58 +0.2 388,719 - GFF2701 0.58 +0.2 388,719 - GFF2701 0.58 -0.2 388,719 - GFF2701 0.58 -0.7 388,741 - GFF2701 0.61 +0.6 388,741 - GFF2701 0.61 -0.7 389,036 + +0.6 389,043 - -0.9 389,043 - -0.1 389,043 - +0.2 389,045 + +1.2 389,046 - -0.5 389,051 + -0.6 389,051 + +0.1 389,052 - -0.2 389,052 - -1.9 389,052 - -0.2 389,071 + +0.2 389,072 - +1.3 389,072 - +0.4 389,072 - -0.5 389,108 + -1.0 389,108 + +0.2 389,109 - -0.1 389,133 + +0.4 389,134 - -0.2 389,170 + -1.1 389,234 - -1.3 389,235 + -0.5 389,274 + +0.4 389,274 + +0.4 389,275 - -0.6 389,275 - +0.5 389,307 + +0.2 389,308 - -0.3 389,308 - +0.0 389,308 - +0.1 389,308 - +0.6 389,308 - +0.3 389,319 + -0.4 389,319 + +0.3 389,319 + +0.3 389,320 - -0.0 389,443 + GFF2702 0.12 +1.0 389,443 + GFF2702 0.12 +0.6 389,443 + GFF2702 0.12 -0.4 389,443 + GFF2702 0.12 -0.1 389,444 - GFF2702 0.12 +0.7 389,444 - GFF2702 0.12 +0.1 389,445 + GFF2702 0.12 +0.2 389,445 + GFF2702 0.12 +0.5 389,445 + GFF2702 0.12 -0.5 389,446 - GFF2702 0.12 +0.4 389,446 - GFF2702 0.12 +0.7 389,446 - GFF2702 0.12 +0.2 389,446 - GFF2702 0.12 +0.1 389,488 + GFF2702 0.14 -0.6 389,488 + GFF2702 0.14 -0.3 389,488 + GFF2702 0.14 +0.4 389,506 - GFF2702 0.14 +0.7 389,661 + GFF2702 0.20 -1.0 389,661 + GFF2702 0.20 -0.3 389,661 + GFF2702 0.20 -0.8 389,661 + GFF2702 0.20 -0.4 389,661 + GFF2702 0.20 +0.1 389,661 + GFF2702 0.20 -1.4 389,662 - GFF2702 0.20 +0.7 389,662 - GFF2702 0.20 -1.1 389,662 - GFF2702 0.20 -0.6 389,662 - GFF2702 0.20 +0.3 389,662 - GFF2702 0.20 +0.5 389,662 - GFF2702 0.20 +0.6 389,882 + GFF2702 0.29 -1.0 389,882 + GFF2702 0.29 +0.0 389,883 - GFF2702 0.29 +0.3 389,883 - GFF2702 0.29 +1.6 389,893 - GFF2702 0.29 +0.2 389,893 - GFF2702 0.29 +0.2 389,893 - GFF2702 0.29 -0.3 389,904 + GFF2702 0.30 +1.2 389,905 - GFF2702 0.30 +0.8 389,906 - GFF2702 0.30 -1.2 389,928 + GFF2702 0.31 -0.2 390,013 - GFF2702 0.34 -0.6 390,013 - GFF2702 0.34 +0.5 390,013 - GFF2702 0.34 -0.3 390,013 - GFF2702 0.34 -0.8
Or see this region's nucleotide sequence