Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2598 and GFF2599 overlap by 1 nucleotides GFF2599 and GFF2600 are separated by 772 nucleotides
GFF2598 - hypothetical protein, at 281,723 to 283,267
GFF2598
GFF2599 - hypothetical protein, at 283,267 to 284,118
GFF2599
GFF2600 - hypothetical protein, at 284,891 to 286,087
GFF2600
Position (kb) 283
284
285 Strain fitness (log2 ratio) -2
-1
0
1 at 282.362 kb on - strand, within GFF2598 at 282.375 kb on + strand, within GFF2598 at 282.375 kb on + strand, within GFF2598 at 282.375 kb on + strand, within GFF2598 at 282.375 kb on + strand, within GFF2598 at 282.376 kb on - strand, within GFF2598 at 282.376 kb on - strand, within GFF2598 at 282.376 kb on - strand, within GFF2598 at 282.469 kb on + strand, within GFF2598 at 282.469 kb on + strand, within GFF2598 at 282.494 kb on + strand, within GFF2598 at 282.494 kb on + strand, within GFF2598 at 282.494 kb on + strand, within GFF2598 at 282.494 kb on + strand, within GFF2598 at 282.495 kb on - strand, within GFF2598 at 282.495 kb on - strand, within GFF2598 at 282.495 kb on - strand, within GFF2598 at 282.495 kb on - strand, within GFF2598 at 282.626 kb on - strand, within GFF2598 at 282.652 kb on + strand, within GFF2598 at 282.653 kb on - strand, within GFF2598 at 282.653 kb on - strand, within GFF2598 at 282.653 kb on - strand, within GFF2598 at 282.653 kb on - strand, within GFF2598 at 282.702 kb on + strand, within GFF2598 at 282.702 kb on + strand, within GFF2598 at 282.702 kb on + strand, within GFF2598 at 282.702 kb on + strand, within GFF2598 at 282.703 kb on - strand, within GFF2598 at 282.703 kb on - strand, within GFF2598 at 282.703 kb on - strand, within GFF2598 at 282.703 kb on - strand, within GFF2598 at 282.703 kb on - strand, within GFF2598 at 282.858 kb on + strand, within GFF2598 at 282.858 kb on + strand, within GFF2598 at 282.859 kb on - strand, within GFF2598 at 282.888 kb on + strand, within GFF2598 at 282.903 kb on + strand, within GFF2598 at 282.903 kb on + strand, within GFF2598 at 282.904 kb on - strand, within GFF2598 at 282.996 kb on + strand, within GFF2598 at 282.996 kb on + strand, within GFF2598 at 282.997 kb on - strand, within GFF2598 at 283.175 kb on + strand at 283.175 kb on + strand at 283.176 kb on - strand at 283.176 kb on - strand at 283.176 kb on - strand at 283.176 kb on - strand at 283.176 kb on - strand at 283.193 kb on + strand at 283.193 kb on + strand at 283.194 kb on - strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.277 kb on + strand at 283.278 kb on - strand at 283.278 kb on - strand at 283.278 kb on - strand at 283.278 kb on - strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.322 kb on + strand at 283.323 kb on - strand at 283.323 kb on - strand at 283.323 kb on - strand at 283.323 kb on - strand at 283.346 kb on + strand at 283.347 kb on - strand at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.399 kb on + strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.400 kb on - strand, within GFF2599 at 283.429 kb on + strand, within GFF2599 at 283.429 kb on + strand, within GFF2599 at 283.430 kb on - strand, within GFF2599 at 283.430 kb on - strand, within GFF2599 at 283.430 kb on - strand, within GFF2599 at 283.492 kb on + strand, within GFF2599 at 283.493 kb on - strand, within GFF2599 at 283.534 kb on + strand, within GFF2599 at 283.534 kb on + strand, within GFF2599 at 283.534 kb on + strand, within GFF2599 at 283.534 kb on + strand, within GFF2599 at 283.535 kb on - strand, within GFF2599 at 283.535 kb on - strand, within GFF2599 at 283.535 kb on - strand, within GFF2599 at 283.535 kb on - strand, within GFF2599 at 283.592 kb on - strand, within GFF2599 at 283.655 kb on + strand, within GFF2599 at 283.655 kb on + strand, within GFF2599 at 283.656 kb on - strand, within GFF2599 at 283.656 kb on - strand, within GFF2599 at 283.741 kb on + strand, within GFF2599 at 283.742 kb on - strand, within GFF2599 at 283.742 kb on - strand, within GFF2599 at 283.791 kb on + strand, within GFF2599 at 283.791 kb on + strand, within GFF2599 at 283.791 kb on + strand, within GFF2599 at 283.792 kb on - strand, within GFF2599 at 283.809 kb on - strand, within GFF2599 at 283.816 kb on + strand, within GFF2599 at 283.816 kb on + strand, within GFF2599 at 283.882 kb on + strand, within GFF2599 at 283.883 kb on - strand, within GFF2599 at 283.883 kb on - strand, within GFF2599 at 283.883 kb on - strand, within GFF2599 at 283.883 kb on - strand, within GFF2599 at 283.883 kb on - strand, within GFF2599 at 283.900 kb on + strand, within GFF2599 at 283.900 kb on + strand, within GFF2599 at 283.901 kb on - strand, within GFF2599 at 283.901 kb on - strand, within GFF2599 at 283.901 kb on - strand, within GFF2599 at 283.935 kb on + strand, within GFF2599 at 283.935 kb on + strand, within GFF2599 at 283.935 kb on + strand, within GFF2599 at 283.936 kb on - strand, within GFF2599 at 283.936 kb on - strand, within GFF2599 at 283.936 kb on - strand, within GFF2599 at 283.939 kb on + strand, within GFF2599 at 283.939 kb on + strand, within GFF2599 at 283.940 kb on - strand, within GFF2599 at 283.940 kb on - strand, within GFF2599 at 283.940 kb on - strand, within GFF2599 at 284.010 kb on + strand, within GFF2599 at 284.011 kb on - strand, within GFF2599 at 284.054 kb on - strand at 284.054 kb on - strand at 284.054 kb on - strand at 284.054 kb on - strand at 284.054 kb on - strand at 284.054 kb on - strand at 284.054 kb on - strand at 284.063 kb on + strand at 284.063 kb on + strand at 284.064 kb on - strand at 284.139 kb on + strand at 284.157 kb on + strand at 284.157 kb on + strand at 284.222 kb on + strand at 284.251 kb on + strand at 284.251 kb on + strand at 284.251 kb on + strand at 284.251 kb on + strand at 284.252 kb on - strand at 284.252 kb on - strand at 284.252 kb on - strand at 284.338 kb on + strand at 284.339 kb on - strand at 284.382 kb on + strand at 284.383 kb on - strand at 284.389 kb on + strand at 284.389 kb on + strand at 284.390 kb on - strand at 284.390 kb on - strand at 284.421 kb on + strand at 284.440 kb on + strand at 284.441 kb on - strand at 284.441 kb on - strand at 284.463 kb on + strand at 284.463 kb on + strand at 284.464 kb on - strand at 284.515 kb on + strand at 284.530 kb on + strand at 284.531 kb on - strand at 284.531 kb on - strand at 284.569 kb on - strand at 284.670 kb on + strand at 284.670 kb on + strand at 284.752 kb on + strand at 284.940 kb on - strand at 284.940 kb on - strand at 285.017 kb on + strand, within GFF2600 at 285.017 kb on + strand, within GFF2600 at 285.017 kb on + strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.018 kb on - strand, within GFF2600 at 285.038 kb on + strand, within GFF2600 at 285.038 kb on + strand, within GFF2600 at 285.038 kb on + strand, within GFF2600
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 282,362 - GFF2598 0.41 +0.4 282,375 + GFF2598 0.42 -0.4 282,375 + GFF2598 0.42 -0.4 282,375 + GFF2598 0.42 -1.2 282,375 + GFF2598 0.42 +1.0 282,376 - GFF2598 0.42 -1.1 282,376 - GFF2598 0.42 +0.8 282,376 - GFF2598 0.42 +0.2 282,469 + GFF2598 0.48 +0.2 282,469 + GFF2598 0.48 +0.2 282,494 + GFF2598 0.50 -0.7 282,494 + GFF2598 0.50 +0.5 282,494 + GFF2598 0.50 +0.0 282,494 + GFF2598 0.50 -0.8 282,495 - GFF2598 0.50 -0.8 282,495 - GFF2598 0.50 +1.4 282,495 - GFF2598 0.50 +0.5 282,495 - GFF2598 0.50 +0.8 282,626 - GFF2598 0.58 -1.0 282,652 + GFF2598 0.60 +0.8 282,653 - GFF2598 0.60 +0.9 282,653 - GFF2598 0.60 -0.0 282,653 - GFF2598 0.60 +1.3 282,653 - GFF2598 0.60 +0.3 282,702 + GFF2598 0.63 +0.4 282,702 + GFF2598 0.63 +1.5 282,702 + GFF2598 0.63 +0.0 282,702 + GFF2598 0.63 +0.8 282,703 - GFF2598 0.63 -0.2 282,703 - GFF2598 0.63 -1.8 282,703 - GFF2598 0.63 +0.0 282,703 - GFF2598 0.63 -0.4 282,703 - GFF2598 0.63 +0.0 282,858 + GFF2598 0.73 +0.8 282,858 + GFF2598 0.73 -0.3 282,859 - GFF2598 0.74 +0.2 282,888 + GFF2598 0.75 -0.4 282,903 + GFF2598 0.76 -0.9 282,903 + GFF2598 0.76 +0.7 282,904 - GFF2598 0.76 +1.1 282,996 + GFF2598 0.82 -0.3 282,996 + GFF2598 0.82 +0.2 282,997 - GFF2598 0.82 -0.7 283,175 + +0.3 283,175 + +0.2 283,176 - +0.4 283,176 - -0.2 283,176 - -0.5 283,176 - +0.5 283,176 - +0.2 283,193 + +0.3 283,193 + +0.8 283,194 - -0.3 283,277 + +1.2 283,277 + -0.4 283,277 + +0.7 283,277 + +0.1 283,277 + -0.5 283,277 + +0.6 283,277 + +0.6 283,278 - -1.0 283,278 - +0.3 283,278 - +1.1 283,278 - -0.1 283,322 + +0.2 283,322 + -0.3 283,322 + -0.2 283,322 + +0.5 283,322 + +0.4 283,322 + -0.4 283,322 + +1.0 283,322 + -0.7 283,323 - -0.9 283,323 - +0.8 283,323 - +0.5 283,323 - +0.2 283,346 + +0.5 283,347 - -0.1 283,399 + GFF2599 0.15 +1.2 283,399 + GFF2599 0.15 -0.5 283,399 + GFF2599 0.15 -0.1 283,399 + GFF2599 0.15 -0.2 283,399 + GFF2599 0.15 -0.4 283,399 + GFF2599 0.15 +0.8 283,399 + GFF2599 0.15 -0.3 283,399 + GFF2599 0.15 -0.7 283,399 + GFF2599 0.15 +0.2 283,399 + GFF2599 0.15 -0.5 283,400 - GFF2599 0.16 -0.7 283,400 - GFF2599 0.16 +0.2 283,400 - GFF2599 0.16 +1.0 283,400 - GFF2599 0.16 -0.7 283,400 - GFF2599 0.16 -0.8 283,400 - GFF2599 0.16 -0.6 283,400 - GFF2599 0.16 -0.0 283,429 + GFF2599 0.19 +1.2 283,429 + GFF2599 0.19 -1.7 283,430 - GFF2599 0.19 +0.3 283,430 - GFF2599 0.19 +0.0 283,430 - GFF2599 0.19 -0.3 283,492 + GFF2599 0.26 -0.2 283,493 - GFF2599 0.27 +0.1 283,534 + GFF2599 0.31 -0.1 283,534 + GFF2599 0.31 +0.3 283,534 + GFF2599 0.31 +0.5 283,534 + GFF2599 0.31 -0.4 283,535 - GFF2599 0.31 +0.3 283,535 - GFF2599 0.31 +1.4 283,535 - GFF2599 0.31 -1.0 283,535 - GFF2599 0.31 +0.3 283,592 - GFF2599 0.38 +0.0 283,655 + GFF2599 0.46 +0.8 283,655 + GFF2599 0.46 +1.0 283,656 - GFF2599 0.46 +0.5 283,656 - GFF2599 0.46 -0.2 283,741 + GFF2599 0.56 -0.4 283,742 - GFF2599 0.56 +0.2 283,742 - GFF2599 0.56 +0.0 283,791 + GFF2599 0.62 -0.4 283,791 + GFF2599 0.62 +0.1 283,791 + GFF2599 0.62 -1.4 283,792 - GFF2599 0.62 -0.1 283,809 - GFF2599 0.64 +0.0 283,816 + GFF2599 0.64 +1.2 283,816 + GFF2599 0.64 -0.9 283,882 + GFF2599 0.72 -0.5 283,883 - GFF2599 0.72 -0.0 283,883 - GFF2599 0.72 +0.2 283,883 - GFF2599 0.72 +0.3 283,883 - GFF2599 0.72 -0.3 283,883 - GFF2599 0.72 +0.3 283,900 + GFF2599 0.74 -1.0 283,900 + GFF2599 0.74 +0.4 283,901 - GFF2599 0.74 -0.2 283,901 - GFF2599 0.74 +0.3 283,901 - GFF2599 0.74 -0.1 283,935 + GFF2599 0.78 -0.1 283,935 + GFF2599 0.78 -0.2 283,935 + GFF2599 0.78 -0.8 283,936 - GFF2599 0.79 +0.5 283,936 - GFF2599 0.79 +0.4 283,936 - GFF2599 0.79 +0.2 283,939 + GFF2599 0.79 +0.0 283,939 + GFF2599 0.79 +0.8 283,940 - GFF2599 0.79 -0.5 283,940 - GFF2599 0.79 -0.0 283,940 - GFF2599 0.79 +0.8 284,010 + GFF2599 0.87 +0.6 284,011 - GFF2599 0.87 -0.1 284,054 - +0.3 284,054 - +0.0 284,054 - +0.2 284,054 - -0.6 284,054 - +0.1 284,054 - -0.1 284,054 - +0.4 284,063 + -0.3 284,063 + -0.1 284,064 - -0.8 284,139 + +0.3 284,157 + -0.2 284,157 + -0.3 284,222 + +0.4 284,251 + -0.1 284,251 + +0.3 284,251 + -0.3 284,251 + +0.7 284,252 - -0.4 284,252 - -0.3 284,252 - +0.4 284,338 + -0.3 284,339 - +0.4 284,382 + -0.5 284,383 - -0.1 284,389 + -0.2 284,389 + -0.5 284,390 - +0.9 284,390 - +1.0 284,421 + +0.0 284,440 + +0.0 284,441 - -0.6 284,441 - +0.5 284,463 + -0.3 284,463 + -0.1 284,464 - +1.6 284,515 + -1.1 284,530 + -0.6 284,531 - +0.6 284,531 - +0.4 284,569 - -0.3 284,670 + -1.0 284,670 + +0.5 284,752 + -0.0 284,940 - +0.2 284,940 - +0.8 285,017 + GFF2600 0.11 +0.0 285,017 + GFF2600 0.11 -0.9 285,017 + GFF2600 0.11 +0.1 285,018 - GFF2600 0.11 -0.1 285,018 - GFF2600 0.11 +0.5 285,018 - GFF2600 0.11 +0.7 285,018 - GFF2600 0.11 -0.3 285,018 - GFF2600 0.11 -0.7 285,018 - GFF2600 0.11 -0.5 285,018 - GFF2600 0.11 -0.4 285,018 - GFF2600 0.11 -0.0 285,018 - GFF2600 0.11 -0.2 285,038 + GFF2600 0.12 -1.7 285,038 + GFF2600 0.12 -0.8 285,038 + GFF2600 0.12 +0.5
Or see this region's nucleotide sequence