Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2595 and GFF2596 overlap by 4 nucleotides GFF2596 and GFF2597 overlap by 1 nucleotides
GFF2595 - hypothetical protein, at 277,952 to 279,124
GFF2595
GFF2596 - hypothetical protein, at 279,121 to 279,609
GFF2596
GFF2597 - hypothetical protein, at 279,609 to 281,576
GFF2597
Position (kb) 277
278
279
280 Strain fitness (log2 ratio) -2
-1
0
1 at 276.956 kb on + strand at 276.956 kb on + strand at 276.956 kb on + strand at 276.956 kb on + strand at 276.957 kb on - strand at 276.982 kb on + strand at 276.982 kb on + strand at 276.982 kb on + strand at 277.011 kb on - strand at 277.011 kb on - strand at 277.119 kb on - strand at 277.181 kb on + strand at 277.181 kb on + strand at 277.181 kb on + strand at 277.182 kb on - strand at 277.182 kb on - strand at 277.182 kb on - strand at 277.200 kb on + strand at 277.217 kb on + strand at 277.217 kb on + strand at 277.217 kb on + strand at 277.217 kb on + strand at 277.218 kb on - strand at 277.218 kb on - strand at 277.218 kb on - strand at 277.306 kb on + strand at 277.306 kb on + strand at 277.306 kb on + strand at 277.306 kb on + strand at 277.307 kb on - strand at 277.307 kb on - strand at 277.307 kb on - strand at 277.327 kb on - strand at 277.327 kb on - strand at 277.340 kb on + strand at 277.471 kb on - strand at 277.574 kb on - strand at 277.574 kb on - strand at 277.679 kb on + strand at 277.688 kb on + strand at 277.688 kb on + strand at 277.689 kb on - strand at 277.689 kb on - strand at 277.689 kb on - strand at 277.689 kb on - strand at 277.864 kb on + strand at 277.865 kb on - strand at 277.876 kb on + strand at 277.876 kb on + strand at 277.877 kb on - strand at 277.877 kb on - strand at 277.903 kb on + strand at 277.904 kb on - strand at 277.904 kb on - strand at 277.910 kb on + strand at 277.918 kb on + strand at 277.929 kb on + strand at 278.003 kb on + strand at 278.003 kb on + strand at 278.003 kb on + strand at 278.004 kb on - strand at 278.004 kb on - strand at 278.004 kb on - strand at 278.007 kb on + strand at 278.007 kb on + strand at 278.008 kb on - strand at 278.028 kb on + strand at 278.028 kb on + strand at 278.028 kb on + strand at 278.073 kb on + strand, within GFF2595 at 278.073 kb on + strand, within GFF2595 at 278.074 kb on - strand, within GFF2595 at 278.074 kb on - strand, within GFF2595 at 278.088 kb on + strand, within GFF2595 at 278.088 kb on + strand, within GFF2595 at 278.089 kb on - strand, within GFF2595 at 278.181 kb on + strand, within GFF2595 at 278.181 kb on + strand, within GFF2595 at 278.181 kb on + strand, within GFF2595 at 278.181 kb on + strand, within GFF2595 at 278.181 kb on + strand, within GFF2595 at 278.182 kb on - strand, within GFF2595 at 278.182 kb on - strand, within GFF2595 at 278.182 kb on - strand, within GFF2595 at 278.182 kb on - strand, within GFF2595 at 278.577 kb on - strand, within GFF2595 at 278.675 kb on + strand, within GFF2595 at 278.675 kb on + strand, within GFF2595 at 278.675 kb on + strand, within GFF2595 at 278.675 kb on + strand, within GFF2595 at 278.676 kb on - strand, within GFF2595 at 278.676 kb on - strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.679 kb on + strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.680 kb on - strand, within GFF2595 at 278.704 kb on + strand, within GFF2595 at 278.800 kb on - strand, within GFF2595 at 278.800 kb on - strand, within GFF2595 at 278.853 kb on + strand, within GFF2595 at 278.853 kb on + strand, within GFF2595 at 278.853 kb on + strand, within GFF2595 at 278.975 kb on + strand, within GFF2595 at 278.976 kb on - strand, within GFF2595 at 279.075 kb on + strand at 279.075 kb on + strand at 279.076 kb on - strand at 279.076 kb on - strand at 279.076 kb on - strand at 279.076 kb on - strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.092 kb on + strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.093 kb on - strand at 279.205 kb on + strand, within GFF2596 at 279.205 kb on + strand, within GFF2596 at 279.205 kb on + strand, within GFF2596 at 279.205 kb on + strand, within GFF2596 at 279.205 kb on + strand, within GFF2596 at 279.205 kb on + strand, within GFF2596 at 279.206 kb on - strand, within GFF2596 at 279.206 kb on - strand, within GFF2596 at 279.206 kb on - strand, within GFF2596 at 279.206 kb on - strand, within GFF2596 at 279.230 kb on + strand, within GFF2596 at 279.230 kb on + strand, within GFF2596 at 279.230 kb on + strand, within GFF2596 at 279.237 kb on + strand, within GFF2596 at 279.237 kb on + strand, within GFF2596 at 279.238 kb on - strand, within GFF2596 at 279.238 kb on - strand, within GFF2596 at 279.238 kb on - strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.282 kb on + strand, within GFF2596 at 279.283 kb on - strand, within GFF2596 at 279.283 kb on - strand, within GFF2596 at 279.283 kb on - strand, within GFF2596 at 279.284 kb on - strand, within GFF2596 at 279.324 kb on - strand, within GFF2596 at 279.338 kb on + strand, within GFF2596 at 279.339 kb on - strand, within GFF2596 at 279.361 kb on + strand, within GFF2596 at 279.361 kb on + strand, within GFF2596 at 279.361 kb on + strand, within GFF2596 at 279.361 kb on + strand, within GFF2596 at 279.361 kb on + strand, within GFF2596 at 279.362 kb on - strand, within GFF2596 at 279.362 kb on - strand, within GFF2596 at 279.362 kb on - strand, within GFF2596 at 279.362 kb on - strand, within GFF2596 at 279.362 kb on - strand, within GFF2596 at 279.366 kb on - strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.457 kb on + strand, within GFF2596 at 279.459 kb on + strand, within GFF2596 at 279.459 kb on + strand, within GFF2596 at 279.459 kb on + strand, within GFF2596 at 279.460 kb on - strand, within GFF2596 at 279.460 kb on - strand, within GFF2596 at 279.460 kb on - strand, within GFF2596 at 279.460 kb on - strand, within GFF2596 at 279.520 kb on + strand, within GFF2596 at 279.520 kb on + strand, within GFF2596 at 279.521 kb on - strand, within GFF2596 at 279.521 kb on - strand, within GFF2596 at 279.638 kb on - strand at 279.750 kb on + strand at 279.751 kb on - strand at 279.854 kb on - strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.904 kb on + strand, within GFF2597 at 279.950 kb on + strand, within GFF2597 at 279.951 kb on - strand, within GFF2597 at 279.951 kb on - strand, within GFF2597 at 280.081 kb on - strand, within GFF2597 at 280.081 kb on - strand, within GFF2597 at 280.081 kb on - strand, within GFF2597 at 280.107 kb on + strand, within GFF2597 at 280.108 kb on - strand, within GFF2597 at 280.108 kb on - strand, within GFF2597 at 280.108 kb on - strand, within GFF2597
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 276,956 + -0.4 276,956 + -0.1 276,956 + -0.3 276,956 + +0.6 276,957 - +0.7 276,982 + +0.7 276,982 + +0.2 276,982 + -0.2 277,011 - +0.9 277,011 - +0.5 277,119 - +0.7 277,181 + +0.7 277,181 + -0.2 277,181 + -0.1 277,182 - +0.4 277,182 - -0.4 277,182 - -0.1 277,200 + +0.2 277,217 + +0.1 277,217 + -0.1 277,217 + +0.2 277,217 + +0.7 277,218 - -1.9 277,218 - +0.7 277,218 - -1.0 277,306 + +0.3 277,306 + +0.3 277,306 + +1.7 277,306 + -0.1 277,307 - +0.2 277,307 - -0.5 277,307 - -0.2 277,327 - +0.7 277,327 - +1.4 277,340 + +0.5 277,471 - +0.5 277,574 - +0.2 277,574 - +0.0 277,679 + -0.2 277,688 + -0.2 277,688 + +1.6 277,689 - +0.5 277,689 - +0.2 277,689 - -0.7 277,689 - -0.1 277,864 + -0.4 277,865 - -0.2 277,876 + +0.5 277,876 + +0.8 277,877 - +0.7 277,877 - -0.1 277,903 + +0.3 277,904 - -0.7 277,904 - +0.2 277,910 + +0.3 277,918 + -1.3 277,929 + +0.0 278,003 + -0.3 278,003 + -0.5 278,003 + -0.4 278,004 - +0.0 278,004 - -0.5 278,004 - -1.0 278,007 + -0.6 278,007 + +0.1 278,008 - -0.6 278,028 + -1.8 278,028 + +0.7 278,028 + -0.1 278,073 + GFF2595 0.10 +0.2 278,073 + GFF2595 0.10 -0.2 278,074 - GFF2595 0.10 -0.7 278,074 - GFF2595 0.10 -0.6 278,088 + GFF2595 0.12 +0.5 278,088 + GFF2595 0.12 -0.2 278,089 - GFF2595 0.12 -1.1 278,181 + GFF2595 0.20 -1.1 278,181 + GFF2595 0.20 -1.7 278,181 + GFF2595 0.20 -0.2 278,181 + GFF2595 0.20 -0.9 278,181 + GFF2595 0.20 -0.0 278,182 - GFF2595 0.20 -0.7 278,182 - GFF2595 0.20 -0.8 278,182 - GFF2595 0.20 -0.0 278,182 - GFF2595 0.20 -0.9 278,577 - GFF2595 0.53 -0.4 278,675 + GFF2595 0.62 +0.2 278,675 + GFF2595 0.62 -2.3 278,675 + GFF2595 0.62 +1.2 278,675 + GFF2595 0.62 +0.1 278,676 - GFF2595 0.62 +0.2 278,676 - GFF2595 0.62 -0.2 278,679 + GFF2595 0.62 +0.7 278,679 + GFF2595 0.62 +0.8 278,679 + GFF2595 0.62 -0.5 278,679 + GFF2595 0.62 -0.5 278,679 + GFF2595 0.62 +0.0 278,679 + GFF2595 0.62 +0.8 278,680 - GFF2595 0.62 -0.6 278,680 - GFF2595 0.62 -1.3 278,680 - GFF2595 0.62 +0.3 278,680 - GFF2595 0.62 -0.1 278,680 - GFF2595 0.62 -0.2 278,680 - GFF2595 0.62 +0.2 278,704 + GFF2595 0.64 -0.5 278,800 - GFF2595 0.72 -0.1 278,800 - GFF2595 0.72 -0.2 278,853 + GFF2595 0.77 -0.4 278,853 + GFF2595 0.77 +0.8 278,853 + GFF2595 0.77 -0.8 278,975 + GFF2595 0.87 +0.3 278,976 - GFF2595 0.87 +0.1 279,075 + -0.7 279,075 + +1.7 279,076 - -0.2 279,076 - -1.7 279,076 - +1.3 279,076 - -0.2 279,092 + +0.5 279,092 + -0.2 279,092 + +0.1 279,092 + -0.3 279,092 + +0.7 279,092 + +0.7 279,092 + -0.5 279,093 - -0.1 279,093 - -0.3 279,093 - +0.3 279,093 - -0.7 279,093 - -0.9 279,093 - +0.1 279,093 - -0.0 279,093 - +0.2 279,093 - -0.2 279,093 - +0.2 279,093 - +0.2 279,093 - -1.4 279,093 - +0.0 279,205 + GFF2596 0.17 -0.7 279,205 + GFF2596 0.17 -0.3 279,205 + GFF2596 0.17 +1.3 279,205 + GFF2596 0.17 -0.4 279,205 + GFF2596 0.17 -1.3 279,205 + GFF2596 0.17 -0.2 279,206 - GFF2596 0.17 -0.4 279,206 - GFF2596 0.17 -0.7 279,206 - GFF2596 0.17 -0.1 279,206 - GFF2596 0.17 -0.4 279,230 + GFF2596 0.22 -0.5 279,230 + GFF2596 0.22 -0.9 279,230 + GFF2596 0.22 -1.1 279,237 + GFF2596 0.24 -0.0 279,237 + GFF2596 0.24 +1.3 279,238 - GFF2596 0.24 -1.1 279,238 - GFF2596 0.24 -0.2 279,238 - GFF2596 0.24 +0.2 279,282 + GFF2596 0.33 -0.4 279,282 + GFF2596 0.33 +0.2 279,282 + GFF2596 0.33 -1.0 279,282 + GFF2596 0.33 -1.2 279,282 + GFF2596 0.33 +0.5 279,282 + GFF2596 0.33 +0.9 279,283 - GFF2596 0.33 -0.5 279,283 - GFF2596 0.33 -0.3 279,283 - GFF2596 0.33 +0.7 279,284 - GFF2596 0.33 -0.3 279,324 - GFF2596 0.42 -0.3 279,338 + GFF2596 0.44 -0.8 279,339 - GFF2596 0.45 +0.3 279,361 + GFF2596 0.49 -0.4 279,361 + GFF2596 0.49 -0.8 279,361 + GFF2596 0.49 +0.1 279,361 + GFF2596 0.49 +0.2 279,361 + GFF2596 0.49 -0.4 279,362 - GFF2596 0.49 +0.9 279,362 - GFF2596 0.49 -0.2 279,362 - GFF2596 0.49 +0.2 279,362 - GFF2596 0.49 +0.1 279,362 - GFF2596 0.49 -0.5 279,366 - GFF2596 0.50 +0.2 279,457 + GFF2596 0.69 -0.5 279,457 + GFF2596 0.69 -0.3 279,457 + GFF2596 0.69 -0.7 279,457 + GFF2596 0.69 +0.2 279,457 + GFF2596 0.69 -0.8 279,457 + GFF2596 0.69 -0.6 279,459 + GFF2596 0.69 -0.1 279,459 + GFF2596 0.69 -0.3 279,459 + GFF2596 0.69 +0.3 279,460 - GFF2596 0.69 -0.4 279,460 - GFF2596 0.69 -1.3 279,460 - GFF2596 0.69 -0.3 279,460 - GFF2596 0.69 -0.8 279,520 + GFF2596 0.82 -0.1 279,520 + GFF2596 0.82 +0.3 279,521 - GFF2596 0.82 -0.6 279,521 - GFF2596 0.82 -0.3 279,638 - -1.5 279,750 + +0.8 279,751 - -0.8 279,854 - GFF2597 0.12 -0.4 279,904 + GFF2597 0.15 -0.9 279,904 + GFF2597 0.15 -0.7 279,904 + GFF2597 0.15 +0.9 279,904 + GFF2597 0.15 -1.0 279,904 + GFF2597 0.15 -1.1 279,904 + GFF2597 0.15 -0.9 279,950 + GFF2597 0.17 -0.0 279,951 - GFF2597 0.17 +0.0 279,951 - GFF2597 0.17 -1.0 280,081 - GFF2597 0.24 +1.4 280,081 - GFF2597 0.24 -0.6 280,081 - GFF2597 0.24 -0.1 280,107 + GFF2597 0.25 +0.5 280,108 - GFF2597 0.25 -0.7 280,108 - GFF2597 0.25 -0.9 280,108 - GFF2597 0.25 -1.0
Or see this region's nucleotide sequence