Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2526 and GFF2527 are separated by 483 nucleotides GFF2527 and GFF2528 are separated by 191 nucleotides
GFF2526 - hypothetical protein, at 194,700 to 195,281
GFF2526
GFF2527 - hypothetical protein, at 195,765 to 195,899
GFF2527
GFF2528 - hypothetical protein, at 196,091 to 197,131
GFF2528
Position (kb) 195
196 Strain fitness (log2 ratio) -2
-1
0
1
2 at 194.810 kb on - strand, within GFF2526 at 194.810 kb on - strand, within GFF2526 at 194.810 kb on - strand, within GFF2526 at 194.887 kb on + strand, within GFF2526 at 194.977 kb on + strand, within GFF2526 at 195.011 kb on - strand, within GFF2526 at 195.016 kb on + strand, within GFF2526 at 195.017 kb on - strand, within GFF2526 at 195.017 kb on - strand, within GFF2526 at 195.049 kb on + strand, within GFF2526 at 195.049 kb on + strand, within GFF2526 at 195.049 kb on + strand, within GFF2526 at 195.049 kb on + strand, within GFF2526 at 195.050 kb on - strand, within GFF2526 at 195.050 kb on - strand, within GFF2526 at 195.050 kb on - strand, within GFF2526 at 195.070 kb on + strand, within GFF2526 at 195.118 kb on + strand, within GFF2526 at 195.119 kb on - strand, within GFF2526 at 195.248 kb on - strand at 195.265 kb on + strand at 195.266 kb on - strand at 195.266 kb on - strand at 195.318 kb on + strand at 195.421 kb on - strand at 195.452 kb on + strand at 195.453 kb on - strand at 195.466 kb on - strand at 195.466 kb on - strand at 195.530 kb on + strand at 195.645 kb on - strand at 195.695 kb on + strand at 195.807 kb on + strand, within GFF2527 at 195.807 kb on + strand, within GFF2527 at 195.808 kb on - strand, within GFF2527 at 195.808 kb on - strand, within GFF2527 at 195.924 kb on + strand at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.698 kb on + strand, within GFF2528 at 196.698 kb on + strand, within GFF2528 at 196.803 kb on + strand, within GFF2528 at 196.804 kb on - strand, within GFF2528 at 196.809 kb on + strand, within GFF2528
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 194,810 - GFF2526 0.19 +1.1 194,810 - GFF2526 0.19 +0.7 194,810 - GFF2526 0.19 -0.9 194,887 + GFF2526 0.32 -0.4 194,977 + GFF2526 0.48 +2.4 195,011 - GFF2526 0.53 +0.9 195,016 + GFF2526 0.54 +0.0 195,017 - GFF2526 0.54 +0.2 195,017 - GFF2526 0.54 +1.4 195,049 + GFF2526 0.60 +1.4 195,049 + GFF2526 0.60 -0.7 195,049 + GFF2526 0.60 -0.6 195,049 + GFF2526 0.60 +1.0 195,050 - GFF2526 0.60 +0.4 195,050 - GFF2526 0.60 -1.0 195,050 - GFF2526 0.60 -0.4 195,070 + GFF2526 0.64 -0.3 195,118 + GFF2526 0.72 +0.6 195,119 - GFF2526 0.72 +0.5 195,248 - -0.3 195,265 + -0.3 195,266 - +0.0 195,266 - +0.6 195,318 + +1.1 195,421 - -0.2 195,452 + -0.3 195,453 - +0.4 195,466 - +0.7 195,466 - -2.3 195,530 + +0.6 195,645 - +0.1 195,695 + +1.4 195,807 + GFF2527 0.31 +0.7 195,807 + GFF2527 0.31 -1.1 195,808 - GFF2527 0.32 -2.1 195,808 - GFF2527 0.32 +0.0 195,924 + +0.3 196,653 + GFF2528 0.54 +1.0 196,653 + GFF2528 0.54 -0.2 196,653 + GFF2528 0.54 -0.1 196,653 + GFF2528 0.54 +0.7 196,654 - GFF2528 0.54 +0.5 196,654 - GFF2528 0.54 +0.2 196,654 - GFF2528 0.54 -0.3 196,654 - GFF2528 0.54 +0.4 196,654 - GFF2528 0.54 +0.1 196,698 + GFF2528 0.58 -0.6 196,698 + GFF2528 0.58 +0.1 196,803 + GFF2528 0.68 +1.4 196,804 - GFF2528 0.68 -0.1 196,809 + GFF2528 0.69 -0.2
Or see this region's nucleotide sequence