Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2466 and GFF2467 are separated by 656 nucleotides GFF2467 and GFF2468 are separated by 2 nucleotides GFF2468 and GFF2469 are separated by 10 nucleotides
GFF2466 - lipid kinase YegS, at 123,848 to 124,804
GFF2466
GFF2467 - hypothetical protein, at 125,461 to 126,174
GFF2467
GFF2468 - hypothetical protein, at 126,177 to 126,626
GFF2468
GFF2469 - hypothetical protein, at 126,637 to 127,782
GFF2469
Position (kb) 125
126
127 Strain fitness (log2 ratio) -1
0
1 at 124.560 kb on + strand, within GFF2466 at 124.561 kb on - strand, within GFF2466 at 124.561 kb on - strand, within GFF2466 at 124.617 kb on + strand, within GFF2466 at 124.932 kb on - strand at 124.932 kb on - strand at 124.940 kb on + strand at 124.941 kb on - strand at 125.143 kb on - strand at 125.250 kb on - strand at 125.250 kb on - strand at 125.686 kb on + strand, within GFF2467 at 125.687 kb on - strand, within GFF2467 at 125.879 kb on - strand, within GFF2467 at 126.005 kb on + strand, within GFF2467 at 126.006 kb on - strand, within GFF2467 at 126.683 kb on - strand at 126.770 kb on + strand, within GFF2469 at 126.770 kb on + strand, within GFF2469 at 126.771 kb on - strand, within GFF2469 at 126.771 kb on - strand, within GFF2469 at 126.771 kb on - strand, within GFF2469 at 126.812 kb on + strand, within GFF2469 at 126.935 kb on + strand, within GFF2469 at 126.935 kb on + strand, within GFF2469 at 126.935 kb on + strand, within GFF2469 at 126.935 kb on + strand, within GFF2469 at 126.936 kb on - strand, within GFF2469
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 124,560 + GFF2466 0.74 +0.0 124,561 - GFF2466 0.75 +0.2 124,561 - GFF2466 0.75 -0.8 124,617 + GFF2466 0.80 +1.1 124,932 - +0.1 124,932 - -1.0 124,940 + -0.8 124,941 - -0.3 125,143 - +0.0 125,250 - -1.0 125,250 - -1.6 125,686 + GFF2467 0.32 -1.0 125,687 - GFF2467 0.32 +0.5 125,879 - GFF2467 0.59 +0.3 126,005 + GFF2467 0.76 +0.6 126,006 - GFF2467 0.76 -0.9 126,683 - +0.8 126,770 + GFF2469 0.12 +0.8 126,770 + GFF2469 0.12 -0.4 126,771 - GFF2469 0.12 -0.5 126,771 - GFF2469 0.12 -0.2 126,771 - GFF2469 0.12 -1.4 126,812 + GFF2469 0.15 +0.5 126,935 + GFF2469 0.26 -0.4 126,935 + GFF2469 0.26 +0.4 126,935 + GFF2469 0.26 -1.4 126,935 + GFF2469 0.26 -1.0 126,936 - GFF2469 0.26 +1.2
Or see this region's nucleotide sequence