Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2368 and GFF2369 are separated by 103 nucleotides GFF2369 and GFF2370 are separated by 72 nucleotides GFF2370 and GFF2371 are separated by 18 nucleotides
GFF2368 - hypothetical protein, at 19,492 to 20,385
GFF2368
GFF2369 - Glutamine-dependent NAD(+) synthetase, at 20,489 to 22,153
GFF2369
GFF2370 - hypothetical protein, at 22,226 to 22,810
GFF2370
GFF2371 - hypothetical protein, at 22,829 to 23,116
GFF2371
Position (kb) 20
21
22
23 Strain fitness (log2 ratio) -1
0
1 at 19.504 kb on + strand at 19.504 kb on + strand at 19.849 kb on + strand, within GFF2368 at 19.849 kb on + strand, within GFF2368 at 19.978 kb on + strand, within GFF2368 at 19.979 kb on - strand, within GFF2368 at 19.980 kb on + strand, within GFF2368 at 19.980 kb on + strand, within GFF2368 at 19.981 kb on - strand, within GFF2368 at 20.079 kb on - strand, within GFF2368 at 20.477 kb on + strand at 20.477 kb on + strand at 20.478 kb on - strand at 20.478 kb on - strand at 20.852 kb on + strand, within GFF2369 at 20.852 kb on + strand, within GFF2369 at 20.853 kb on - strand, within GFF2369 at 21.101 kb on + strand, within GFF2369 at 21.101 kb on + strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.300 kb on - strand, within GFF2369 at 21.329 kb on + strand, within GFF2369 at 21.329 kb on + strand, within GFF2369 at 21.330 kb on - strand, within GFF2369 at 21.330 kb on - strand, within GFF2369 at 21.330 kb on - strand, within GFF2369 at 21.522 kb on - strand, within GFF2369 at 21.522 kb on - strand, within GFF2369 at 21.770 kb on + strand, within GFF2369 at 21.770 kb on + strand, within GFF2369 at 21.771 kb on - strand, within GFF2369 at 21.771 kb on - strand, within GFF2369 at 21.771 kb on - strand, within GFF2369 at 21.771 kb on - strand, within GFF2369 at 21.930 kb on - strand, within GFF2369 at 22.122 kb on - strand at 22.151 kb on + strand at 22.152 kb on - strand at 22.280 kb on + strand at 22.281 kb on - strand at 22.281 kb on - strand at 22.281 kb on - strand at 22.468 kb on + strand, within GFF2370 at 22.757 kb on - strand at 23.136 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 19,504 + +0.3 19,504 + +0.2 19,849 + GFF2368 0.40 -0.1 19,849 + GFF2368 0.40 -0.5 19,978 + GFF2368 0.54 +0.1 19,979 - GFF2368 0.54 +0.7 19,980 + GFF2368 0.55 -1.0 19,980 + GFF2368 0.55 +0.5 19,981 - GFF2368 0.55 -0.5 20,079 - GFF2368 0.66 +0.1 20,477 + +0.1 20,477 + -0.2 20,478 - +0.6 20,478 - -1.0 20,852 + GFF2369 0.22 +0.1 20,852 + GFF2369 0.22 +0.1 20,853 - GFF2369 0.22 -0.4 21,101 + GFF2369 0.37 -0.8 21,101 + GFF2369 0.37 -0.2 21,102 - GFF2369 0.37 -1.3 21,102 - GFF2369 0.37 +1.1 21,102 - GFF2369 0.37 -1.1 21,102 - GFF2369 0.37 +0.7 21,102 - GFF2369 0.37 -0.1 21,300 - GFF2369 0.49 -0.6 21,329 + GFF2369 0.50 -0.1 21,329 + GFF2369 0.50 +0.1 21,330 - GFF2369 0.51 +0.7 21,330 - GFF2369 0.51 +1.5 21,330 - GFF2369 0.51 +0.2 21,522 - GFF2369 0.62 -0.6 21,522 - GFF2369 0.62 -0.7 21,770 + GFF2369 0.77 -0.2 21,770 + GFF2369 0.77 -0.1 21,771 - GFF2369 0.77 +1.1 21,771 - GFF2369 0.77 -0.5 21,771 - GFF2369 0.77 -0.1 21,771 - GFF2369 0.77 -1.0 21,930 - GFF2369 0.87 -0.5 22,122 - -0.4 22,151 + -0.1 22,152 - -0.1 22,280 + +0.3 22,281 - -0.7 22,281 - +0.0 22,281 - +0.3 22,468 + GFF2370 0.41 -0.3 22,757 - -0.2 23,136 - -0.4
Or see this region's nucleotide sequence