Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2245 and GFF2246 are separated by 124 nucleotides GFF2246 and GFF2247 are separated by 6 nucleotides GFF2247 and GFF2248 are separated by 144 nucleotides
GFF2245 - Glutathione synthetase, at 949,796 to 950,761
GFF2245
GFF2246 - hypothetical protein, at 950,886 to 951,197
GFF2246
GFF2247 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 951,204 to 951,986
GFF2247
GFF2248 - Competence protein ComM, at 952,131 to 953,663
GFF2248
Position (kb) 951
952 Strain fitness (log2 ratio) -1
0
1 at 950.775 kb on - strand at 950.871 kb on + strand at 950.871 kb on + strand at 950.872 kb on - strand at 950.872 kb on - strand at 950.872 kb on - strand at 951.195 kb on + strand at 951.448 kb on + strand, within GFF2247 at 951.449 kb on - strand, within GFF2247 at 951.449 kb on - strand, within GFF2247 at 951.757 kb on + strand, within GFF2247 at 951.910 kb on + strand at 951.910 kb on + strand at 951.911 kb on - strand at 951.911 kb on - strand at 952.011 kb on + strand at 952.011 kb on + strand at 952.011 kb on + strand at 952.012 kb on - strand at 952.369 kb on - strand, within GFF2248
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 950,775 - +0.9 950,871 + -0.2 950,871 + +0.2 950,872 - -0.5 950,872 - +0.1 950,872 - -0.1 951,195 + +0.7 951,448 + GFF2247 0.31 +0.8 951,449 - GFF2247 0.31 +1.1 951,449 - GFF2247 0.31 -0.8 951,757 + GFF2247 0.71 +0.8 951,910 + -0.4 951,910 + -0.3 951,911 - +0.2 951,911 - -0.5 952,011 + +0.4 952,011 + -0.2 952,011 + +0.9 952,012 - +0.2 952,369 - GFF2248 0.16 -0.7
Or see this region's nucleotide sequence